| MirGeneDB ID | Cbr-Mir-7594-P2b |
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| Family name |
MIR-7594 (all species) |
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| Seed |
GAGGUAG |
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| Species |
Roundworm (Caenorhabditis briggsae) |
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| MiRBase ID |
cbr-mir-7594b-2
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| Paralogues |
Cbr-Mir-7594-P1a
Cbr-Mir-7594-P1b
Cbr-Mir-7594-P2a
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| Orthologues |
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| Node of Origin (locus) |
C. briggsae
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| Node of Origin (family) |
C. briggsae
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Genome context
(CB4) |
III: 10733443-10733505 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UAUUAUUCUGUAAACCGUUGCUUCGUGUUUCCGGGACUGAUCGUAGCCUUCAACACUCGAAGCGAAGUGUUGAGGUAGACGUUUAGCCCGAAAACAAGUUGAAUAACGGUCCUUUUGUAUGGG
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
UAUUAUUCUGUAAACCGUUGC ---| C A U AGC ACUCGA
UUCG UGUUU CGGG CUGA CGU CUUCAAC A
AAGU ACAAA GCCC GAUU GCA GGAGUUG G
GGGUAUGUUUUCCUGGCAAU- UGA^ A - U GAU UGAAGC
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | No |
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Tissue expression
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| Ea |
Ma |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Yo |
Yo |
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| Star sequence |
Cbr-Mir-7594-P2b_5p* |
| mirBase accession | None |
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| Sequence |
0- CCGGGACUGAUCGUAGCCUUCAAC -24
Get sequence
|
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| Mature sequence |
Cbr-Mir-7594-P2b_3p |
| mirBase accession | MIMAT0029601 |
|---|
| Sequence |
40- UGAGGUAGACGUUUAGCCCGAAA -63
Get sequence
|
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