MirGeneDB 3.0
MirGeneDB ID

Cbr-Mir-9-P15

Family name MIR-9 (all species)
Seed UAAAGCU
Species Roundworm (Caenorhabditis briggsae)
MiRBase ID cbr-mir-79
Paralogues Cbr-Mir-9-P14  Cbr-Mir-9-P16 
Orthologues Agr-Mir-9  Bfl-Mir-9  Bko-Mir-9  Bla-Mir-9  Bpl-Mir-9  Cel-Mir-9-P15  Cin-Mir-9  Cte-Mir-9  Dgr-Mir-9  Eba-Mir-9  Egr-Mir-9  Esc-Mir-9  Gsa-Mir-9  Gsp-Mir-9  Hmi-Mir-9  Hru-Mir-9  Isc-Mir-9  Lan-Mir-9  Lgi-Mir-9  Llo-Mir-9  Mom-Mir-9  Npo-Mir-9  Obi-Mir-9  Ofu-Mir-9  Ovu-Mir-9  Pau-Mir-9  Pdu-Mir-9  Pmi-Mir-9  Pve-Mir-9  Rph-Mir-9  Sma-Mir-9  Snu-Mir-9  Spu-Mir-9  War-Mir-9  Xbo-Mir-9 
Node of Origin (locus) Caenorhabditis
Node of Origin (family) Bilateria
Genome context
(CB4)		 I: 1849428-1849490 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
AAAAUCCCACAUUCUAGAACAUUCUCCGAUCUUUGGUGAUUCAGCUUAAAUGAUAGAAUUCAGACGUCUUCAUAAAGCUAGGUUACCAAAGCUCGGCGUUCCAGUUCGACCAUUUUAAUCCUU
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Structure
        10        20          30        40        50        60 
AAAAUCCCACAUUCUAGAACAUUCU--|   U          UC     AA    UAGAAUU 
                           CCGA CUUUGGUGAU  AGCUU  AUGA       C
                           GGCU GAAACCAUUG  UCGAA  UACU       A
UUCCUAAUUUUACCAGCUUGACCUUGC^   C          GA     A-    UCUGCAG 
 120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Ea Ma Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Yo Yo
Star sequence

Cbr-Mir-9-P15_5p*
mirBase accessionNone
Sequence 
0- CUUUGGUGAUUCAGCUUAAAUGA -23
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Mature sequence

Cbr-Mir-9-P15_3p
mirBase accessionMIMAT0000486
Sequence 
41- AUAAAGCUAGGUUACCAAAGCU -63
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