| MirGeneDB ID | Cbr-Mir-231 |
|---|
| Family name |
MIR-231 (all species) |
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| Seed |
AAGCUCG |
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| Species |
Roundworm (Caenorhabditis briggsae) |
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| MiRBase ID |
cbr-mir-231
|
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| Paralogues |
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| Orthologues |
Cel-Mir-231
|
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| Node of Origin (locus) |
Caenorhabditis
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| Node of Origin (family) |
Caenorhabditis
|
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Genome context
(CB4) |
III: 11907645-11907704 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AUAUUUUGCUACUAGCACCUCAAUGUUGUUCUGUCUGUUUCCAUAGCUUAUAUUGUAAGGUACUUAUAAGCUCGUGAACAACAGGCAGGACAACUGGAAGUGGUGUUUUUUUUCAGGCAG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AUAUUUUGCUACUAGCACC--- AAU UC- -| UUGUA
UC GUUGUUCUGUCUGUU CAU AGCUUAUA A
AG CAACAGGACGGACAA GUG UCGAAUAU G
GACGGACUUUUUUUUGUGGUGA GU- CAA C^ UCAUG
. 110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
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Tissue expression
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| Ea |
Ma |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Yo |
Yo |
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| Star sequence |
Cbr-Mir-231_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- CUGUCUGUUUCCAUAGCUUAUA -22
Get sequence
|
|---|
| Mature sequence |
Cbr-Mir-231_3p |
| mirBase accession | MIMAT0001293 |
|---|
| Sequence |
36- UAAGCUCGUGAACAACAGGCAGGA -60
Get sequence
|
|---|
