MirGeneDB 3.0
MirGeneDB ID

Cel-Mir-358-v1

Family name MIR-358 (all species)
Seed UUGGUAU
Species Roundworm (Caenorhabditis elegans)
MiRBase ID cel-mir-358
Paralogues Cel-Mir-358-v2 
Orthologues Cbr-Mir-358-v1 
Node of Origin (locus) Caenorhabditis
Node of Origin (family) Caenorhabditis
Genome context
(ce11)		 chrV: 8580880-8580948 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-358-v1)		 Mir-357 chrV: 8580565-8580627 [-] UCSC Ensembl
Mir-358-v1 chrV: 8580880-8580948 [-] UCSC Ensembl
Mir-358-v2 chrV: 8580880-8580948 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UCUAUCAAUUCAAACUCGCGACGGCUGGCGACCUGGCCAGGCAUUCCAACUGUCAAACUUACAAAGCUUUCUCGACAAUUGGUAUCCCUGUCAAGGUCUCAAUCCGUUCAGCGAAUUCGUUGUUCUAUU
Get precursor sequence
Structure
        10          20         30         40        50        60    
UCUAUCAAUUCAAACUCGC--     C-|  C     -   C   C  U    C  UCAAACUUACA 
                     GACGG  UGG GACCU GGC AGG AU CCAA UG           \
                     UUGCC  ACU CUGGA CUG UCC UA GGUU AC           A
UUAUCUUGUUGCUUAAGCGAC     UA^  -     A   -   C  U    A  AGCUCUUUCGA 
       120       110       100         90         80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Da Ea Mi Wi Yo Yo
Star sequence

Cel-Mir-358-v1_5p*
mirBase accessionMIMAT0015120
Sequence 
0- ACCUGGCCAGGCAUUCCAACUG -22
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Proposed targets microrna.org: MIMAT0015120
Mature sequence

Cel-Mir-358-v1_3p
mirBase accessionMIMAT0000700
Sequence 
47- AUUGGUAUCCCUGUCAAGGUCU -69
Get sequence
Proposed targets microrna.org: MIMAT0000700
TargetScanWorm: cel-miR-358