MirGeneDB 3.0
MirGeneDB ID

Cbr-Mir-305-P1

Family name MIR-305 (all species)
Seed UUGUACU
Species Roundworm (Caenorhabditis briggsae)
MiRBase ID cbr-mir-239a
Paralogues Cbr-Mir-305-P2  Cbr-Mir-305-P3 
Orthologues Aae-Mir-305  Aga-Mir-305  Asu-Mir-305  Bge-Mir-305  Cel-Mir-305-P1  Csc-Mir-305  Dan-Mir-305  Dlo-Mir-305  Dma-Mir-305  Dme-Mir-305  Dmo-Mir-305  Dpu-Mir-305  Dsi-Mir-305  Dya-Mir-305  Gpa-Mir-305  Hme-Mir-305  Isc-Mir-305  Tca-Mir-305  Tur-Mir-305 
Node of Origin (locus) Caenorhabditis
Node of Origin (family) Cryptovermes
Genome context
(CB4)		 X: 15212591-15212656 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-305-P1)		 Mir-305-P2 X: 15211418-15211472 [-] Ensembl
Mir-305-P1 X: 15212591-15212656 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UAGAGAAUGACGAUCCAAGUUUAUGCGAUUUUUGUACUACAAUUAGGUACUGGACACCAGCAGCGAGUGUAUCCAGAAUCUAUACUAGUACAAAAAUAGCUAACAGGAUUAAGAUUUCGAAAUGUU
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Structure
        10            20        30        40        50        60   
UAGAGAAUGACGAUCCAA----|  UAU  G            CAAU     A     CACCAGCA 
                      GUU   GC AUUUUUGUACUA    UAGGU CUGGA        \
                      CAA   CG UAAAAACAUGAU    AUCUA GACCU        G
UUGUAAAGCUUUAGAAUUAGGA^  U--  A            CAU-     A     AUGUGAGC 
    120       110         100        90         80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Ea Ma Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Yo Yo
Mature sequence

Cbr-Mir-305-P1_5p
mirBase accessionMIMAT0001304
Sequence 
0- UUUGUACUACAAUUAGGUACUGGA -24
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Star sequence

Cbr-Mir-305-P1_3p*
mirBase accessionNone
Sequence 
43- CAGAAUCUAUACUAGUACAAAAA -66
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