Mir-305

MirGeneDB ID

Aae-Mir-305

Family name

MIR-305 (all species)

Seed

UUGUACU

Species

Yellow fever mosquito (Aedes aegypti)

MiRBase ID

aae-mir-305

Paralogues

Orthologues

Aga-Mir-305 Asu-Mir-305 Bge-Mir-305 Cbr-Mir-305-P1 Cbr-Mir-305-P2 Cbr-Mir-305-P3 Cel-Mir-305-P1 Cel-Mir-305-P2 Csc-Mir-305 Dan-Mir-305 Dlo-Mir-305 Dma-Mir-305 Dme-Mir-305 Dmo-Mir-305 Dpu-Mir-305 Dsi-Mir-305 Dya-Mir-305 Gpa-Mir-305 Hme-Mir-305 Isc-Mir-305 Lpo-Mir-305-P4 Lpo-Mir-305-P5 Lpo-Mir-305-P6 Lpo-Mir-305-P7 Lpo-Mir-305-P8 Tca-Mir-305 Tur-Mir-305

Node of Origin (locus)

Cryptovermes

Node of Origin (family)

Cryptovermes

Genome context
(Aaeg_L3)

supercont1.24: 495601-495661 [+] Ensembl

Clustered miRNAs
(< 50kb from Mir-305)

Mir-275 supercont1.24: 486551-486613 [+] Ensembl
Mir-305 supercont1.24: 495601-495661 [+] Ensembl

Precursor
(pre-Mir +30nt flank)

UCAACGAAUCAGCUCAAAUGUCACAUGUCUAUUGUACUUCAUCAGGUGCUCUGGUUGUUUUCGAUACCCGGCACAUGUUGGAGUACACUUAAUGUGCUGACAGUAUAACCAUCAGAAUUUA

Get precursor sequence

Structure

        10         20         30        40        50        60
UCAACGAAUCAGCUCAAA-     -|    CUAU         U  G     CU  UUGUU 
                   UGUCA CAUGU    UGUACUUCA CA GUGCU  GG     U
                   ACAGU GUGUA    ACAUGAGGU GU CACGG  CC     U
AUUUAAGACUACCAAUAUG     C^    AUUC         U  A     C-  AUAGC 
 .       110       100        90        80        70