MirGeneDB 3.0
MirGeneDB ID

Aae-Mir-275

Family name MIR-275 (all species)
Seed CAGGUAC
Species Yellow fever mosquito (Aedes aegypti)
MiRBase ID aae-mir-275
Paralogues
Orthologues Aga-Mir-275  Bge-Mir-275  Csc-Mir-275  Dan-Mir-275  Dlo-Mir-275  Dma-Mir-275  Dme-Mir-275  Dmo-Mir-275  Dpu-Mir-275  Dsi-Mir-275  Dya-Mir-275  Gpa-Mir-275  Hme-Mir-275  Isc-Mir-275  Lpo-Mir-275-P3  Lpo-Mir-275-P4-v1  Lpo-Mir-275-P4-v2  Lpo-Mir-275-P5  Lpo-Mir-275-P6  Lpo-Mir-275-P7  Tca-Mir-275 
Node of Origin (locus) Arthropoda
Node of Origin (family) Arthropoda
Genome context
(Aaeg_L3)		 supercont1.24: 486551-486613 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-275)		 Mir-275 supercont1.24: 486551-486613 [+] Ensembl
Mir-305 supercont1.24: 495601-495661 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UGACUCCAGCAGAGUAUCCUUUCGAUUUCGCGCGCUAAGCAGGAACCGAGACUUUGUCAUUUGCUAGCAGUCAGGUACCUGAAGUAGCGCGCGUGAUCAAACAGGAAGCGUCAUCAAGCGACA
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Structure
        10         20         30         40        50        60 
UGACUCCAGCAGAGUAU-   -  C    U         AG-|   A   GA    UUGUCAU 
                  CCU UU GAUU CGCGCGCUA   CAGG ACC  GACU       \
                  GGA AA CUAG GCGCGCGAU   GUCC UGG  CUGA       U
ACAGCGAACUACUGCGAA   C  A    U         GAA^   A   A-    CGAUCGU 
 120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ge Ge So So To To To
Star sequence

Aae-Mir-275_5p*
mirBase accessionMIMAT0014208
Sequence 
0- CGCGCUAAGCAGGAACCGAGACU -23
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Mature sequence

Aae-Mir-275_3p
mirBase accessionMIMAT0014209
Sequence 
40- UCAGGUACCUGAAGUAGCGCGCG -63
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