MirGeneDB 3.0
MirGeneDB ID

Dmo-Mir-275

Family name MIR-275 (all species)
Seed CAGGUAC
Species Fruit fly (Drosophila mojavensis)
MiRBase ID dmo-mir-275
Paralogues
Orthologues Aae-Mir-275  Aga-Mir-275  Bge-Mir-275  Csc-Mir-275  Dan-Mir-275  Dlo-Mir-275  Dma-Mir-275  Dme-Mir-275  Dpu-Mir-275  Dsi-Mir-275  Dya-Mir-275  Gpa-Mir-275  Hme-Mir-275  Isc-Mir-275  Lpo-Mir-275-P3  Lpo-Mir-275-P4-v1  Lpo-Mir-275-P4-v2  Lpo-Mir-275-P5  Lpo-Mir-275-P6  Lpo-Mir-275-P7  Tca-Mir-275 
Node of Origin (locus) Arthropoda
Node of Origin (family) Arthropoda
Genome context
(Dmoj_caf1)		 scaffold_6500: 18399414-18399478 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-275)		 Mir-305 scaffold_6500: 18399269-18399329 [-] Ensembl
Mir-275 scaffold_6500: 18399414-18399478 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
GUCCGCUGCGCCCGUCCGUCUUUUACCGUGCGCGCUAAUCAGUGACCGGGGCUGGUUUCGAUUAUCUCACAGUCAGGUACCUGAAGUAGCGCGCGUGGUGGCUAGACGCAUUCAACGCUCUGCUA
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Structure
        10         20         30         40        50        60  
GUCCGCUGCGCCCGUCC-    U-               A-|   UG   GG    GGUUUCGA 
                  GUCU  UUACCGUGCGCGCUA  UCAG  ACC  GGCU        \
                  CAGA  GGUGGUGCGCGCGAU  AGUC  UGG  CUGA        U
AUCGUCUCGCAACUUACG    UC               GA^   CA   A-    CACUCUAU 
   120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Em Fe Ma Ma
Star sequence

Dmo-Mir-275_5p*
mirBase accessionNone
Sequence 
0- CGCGCUAAUCAGUGACCGGGGCU -23
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Mature sequence

Dmo-Mir-275_3p
mirBase accessionMIMAT0008664
Sequence 
42- UCAGGUACCUGAAGUAGCGCGCG -65
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