| MirGeneDB ID | Gpa-Mir-275 |
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| Family name |
MIR-275 (all species) |
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| Seed |
CAGGUAC |
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| Species |
Tsetse fly (Glossina pallidipes) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Aae-Mir-275
Aga-Mir-275
Bge-Mir-275
Csc-Mir-275
Dan-Mir-275
Dlo-Mir-275
Dma-Mir-275
Dme-Mir-275
Dmo-Mir-275
Dpu-Mir-275
Dsi-Mir-275
Dya-Mir-275
Hme-Mir-275
Isc-Mir-275
Lpo-Mir-275-P3
Lpo-Mir-275-P4-v1
Lpo-Mir-275-P4-v2
Lpo-Mir-275-P5
Lpo-Mir-275-P6
Lpo-Mir-275-P7
Tca-Mir-275
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| Node of Origin (locus) |
Arthropoda
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| Node of Origin (family) |
Arthropoda
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Genome context
(GpalI1) |
Scaffold315: 241102-241168 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UUUUUUUCUUCAGUUUAGUCUAGCACUCUGCGCGCUAAUCAGUGACCGGGGCUGUGAAUUGUAUAAAACCCAAGUCAGGUACCUGAAGUAGCGCGCGAAGUCUUAGGCACCGACAACAUGCAAGAUA
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
UUUUUUUCUUCAGUUUA-- C C A-| UG GG GUGAAUUGU
GUCUAG ACU UGCGCGCUA UCAG ACC GGCU \
CGGAUU UGA GCGCGCGAU AGUC UGG CUGA A
AUAGAACGUACAACAGCCA C A GA^ CA A- ACCCAAAAU
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17), UGUG in loop |
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Tissue expression
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| Star sequence |
Gpa-Mir-275_5p* |
| mirBase accession | None |
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| Sequence |
0- CGCGCUAAUCAGUGACCGGGGCU -23
Get sequence
|
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| Mature sequence |
Gpa-Mir-275_3p |
| mirBase accession | None |
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| Sequence |
44- UCAGGUACCUGAAGUAGCGCGCG -67
Get sequence
|
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