MirGeneDB 3.0
MirGeneDB ID

Dme-Mir-275

Family name MIR-275 (all species)
Seed CAGGUAC
Species Fruit fly (Drosophila melanogaster)
MiRBase ID dme-mir-275
Paralogues
Orthologues Aae-Mir-275  Aga-Mir-275  Bge-Mir-275  Csc-Mir-275  Dan-Mir-275  Dlo-Mir-275  Dma-Mir-275  Dmo-Mir-275  Dpu-Mir-275  Dsi-Mir-275  Dya-Mir-275  Gpa-Mir-275  Hme-Mir-275  Isc-Mir-275  Lpo-Mir-275-P3  Lpo-Mir-275-P4-v1  Lpo-Mir-275-P4-v2  Lpo-Mir-275-P5  Lpo-Mir-275-P6  Lpo-Mir-275-P7  Tca-Mir-275 
Node of Origin (locus) Arthropoda
Node of Origin (family) Arthropoda
Genome context
(Drosophila_melanogaster_BDGP6)		 2L: 7425814-7425875 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-275)		 Mir-275 2L: 7425814-7425875 [+] UCSC Ensembl
Mir-305 2L: 7425979-7426039 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GUUCCCCCGACUGUAAAGUCUCCUACCUUGCGCGCUAAUCAGUGACCGGGGCUGGUUUUUUAUAUACAGUCAGGUACCUGAAGUAGCGCGCGUGGUGGCAGACAUAUAUCUCCAUCUUCACC
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Structure
        10          20        30         40        50        60
GUUCCCCCGACUGUAAA--    C     U         A-|   UG   GG    GGUUUU 
                   GUCU CUACC UGCGCGCUA  UCAG  ACC  GGCU      U
                   CAGA GGUGG GCGCGCGAU  AGUC  UGG  CUGA      U
CCACUUCUACCUCUAUAUA    C     U         GA^   CA   A-    CAUAUA 
120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Bo He He La Ov Sa Wh
Star sequence

Dme-Mir-275_5p*
mirBase accessionMIMAT0020801
Sequence 
0- CGCGCUAAUCAGUGACCGGGGCU -23
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Mature sequence

Dme-Mir-275_3p
mirBase accessionMIMAT0000333
Sequence 
39- UCAGGUACCUGAAGUAGCGCGCG -62
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Proposed targets microrna.org: MIMAT0000333
TargetScanFly: dme-miR-275