| MirGeneDB ID | Hme-Mir-275 |
|---|
| Family name |
MIR-275 (all species) |
|---|
| Seed |
CAGGUAC |
|---|
| Species |
Longwing butterfly (Heliconius melpomene) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
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| Orthologues |
Aae-Mir-275
Aga-Mir-275
Bge-Mir-275
Csc-Mir-275
Dan-Mir-275
Dlo-Mir-275
Dma-Mir-275
Dme-Mir-275
Dmo-Mir-275
Dpu-Mir-275
Dsi-Mir-275
Dya-Mir-275
Gpa-Mir-275
Isc-Mir-275
Lpo-Mir-275-P3
Lpo-Mir-275-P4-v1
Lpo-Mir-275-P4-v2
Lpo-Mir-275-P5
Lpo-Mir-275-P6
Lpo-Mir-275-P7
Tca-Mir-275
|
|---|
| Node of Origin (locus) |
Arthropoda
|
|---|
| Node of Origin (family) |
Arthropoda
|
|---|
Genome context
(Hmel_1) |
HE669248: 31749-31804 [+]
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
GUAGUGUCGCCGUCGGGAGCGGUGGCGUCGCGCGCUACUCUGGCGCCGGGGCUGUUCAGCGAGUCAGGUACCUGAAGUAGCGCGCGGGGCCUCCGCUCGGGUCGCCGCCGGAGCCA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GUAGUGUCGCCGUCGGG-- U G -| U CG GG GUU
AGCGG GGC UCGCGCGCUAC UC GG CC GGCU C
UCGCC CCG GGCGCGCGAUG AG CC GG CUGA A
ACCGAGGCCGCCGCUGGGC U G A^ U AU A- GCG
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Hme-Mir-275_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- CGCGCUACUCUGGCGCCGGGGCU -23
Get sequence
|
|---|
| Mature sequence |
Hme-Mir-275_3p |
| mirBase accession | None |
|---|
| Sequence |
33- UCAGGUACCUGAAGUAGCGCGCG -56
Get sequence
|
|---|
