MirGeneDB 3.0
MirGeneDB ID

Aga-Mir-275

Family name MIR-275 (all species)
Seed CAGGUAC
Species African malaria mosquito (Anopheles gambiae)
MiRBase ID aga-mir-275
Paralogues
Orthologues Aae-Mir-275  Bge-Mir-275  Csc-Mir-275  Dan-Mir-275  Dlo-Mir-275  Dma-Mir-275  Dme-Mir-275  Dmo-Mir-275  Dpu-Mir-275  Dsi-Mir-275  Dya-Mir-275  Gpa-Mir-275  Hme-Mir-275  Isc-Mir-275  Lpo-Mir-275-P3  Lpo-Mir-275-P4-v1  Lpo-Mir-275-P4-v2  Lpo-Mir-275-P5  Lpo-Mir-275-P6  Lpo-Mir-275-P7  Tca-Mir-275 
Node of Origin (locus) Arthropoda
Node of Origin (family) Arthropoda
Genome context
(GCF_943734735.2_idAnoGambNW_F1_1_genomic)		 NC_064602.1: 38099942-38100007 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-275)		 Mir-275 NC_064602.1: 38099942-38100007 [+] Ensembl
Mir-305 NC_064602.1: 38108889-38108951 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
GUGGAUAGCUGCCUGAGCCGUCUAAUGACACGCGCUAAGCAGGAACCGGGACUUGGUACACAUUCGCUAGCAGUCAGGUACCUGAAGUAGCGCGCGUUAUUCGGCUCACAACCAACUAACCAACCA
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Structure
        10          20        30         40        50        60  
GUGGAUAGCUGCCUGAGCC--   U      A       AG-|   A   GG    UGGUACAC 
                     GUC AAUGAC CGCGCUA   CAGG ACC  GACU        A
                     CGG UUAUUG GCGCGAU   GUCC UGG  CUGA        U
ACCAACCAAUCAACCAACACU   C      C       GAA^   A   A-    CGAUCGCU 
    120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ab Ab He He Mi Mi Ov Ov Ov
Star sequence

Aga-Mir-275_5p*
mirBase accessionNone
Sequence 
0- CGCGCUAAGCAGGAACCGGGACU -23
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Mature sequence

Aga-Mir-275_3p
mirBase accessionMIMAT0001508
Sequence 
43- UCAGGUACCUGAAGUAGCGCGCG -66
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