MirGeneDB 3.0

MirGeneDB ID

Aga-Mir-305

Family name MIR-305 (all species)
Seed UUGUACU
Species African malaria mosquito (Anopheles gambiae)
MiRBase ID aga-mir-305
Paralogues
Orthologues Aae-Mir-305  Asu-Mir-305  Bge-Mir-305  Cbr-Mir-305-P1  Cbr-Mir-305-P2  Cbr-Mir-305-P3  Cel-Mir-305-P1  Cel-Mir-305-P2  Csc-Mir-305  Dan-Mir-305  Dlo-Mir-305  Dma-Mir-305  Dme-Mir-305  Dmo-Mir-305  Dpu-Mir-305  Dsi-Mir-305  Dya-Mir-305  Gpa-Mir-305  Hme-Mir-305  Isc-Mir-305  Lpo-Mir-305-P4  Lpo-Mir-305-P5  Lpo-Mir-305-P6  Lpo-Mir-305-P7  Lpo-Mir-305-P8  Tca-Mir-305  Tur-Mir-305 
Node of Origin (locus) Cryptovermes
Node of Origin (family) Cryptovermes
Genome context
(GCF_943734735.2_idAnoGambNW_F1_1_genomic)
NC_064602.1: 38108889-38108951 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-305)
Mir-275 NC_064602.1: 38099942-38100007 [+] Ensembl
Mir-305 NC_064602.1: 38108889-38108951 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
CUCACUGCAUCAUCGCUUUGUCACAUGUCUAUUGUACUUCAUCAGGUGCUCUGGUGGAUUUGAGAAAACCCGGCACAUGUUGGAGUACACUCUAUGUGCUGACAAGAAUUCGUCCGUGCGUGG
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Structure
        10         20         30        40        50        60 
CUCACUGCAUCAUCGCU-      -|    CUAU         U  G     CU  UGGAUU 
                  UUGUCA CAUGU    UGUACUUCA CA GUGCU  GG      U
                  AACAGU GUGUA    ACAUGAGGU GU CACGG  CC      G
GGUGCGUGCCUGCUUAAG      C^    UCUC         U  A     C-  AAAAGA 
 120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Ab Ab He He Mi Mi Ov Ov Ov
Mature sequence

Aga-Mir-305_5p

mirBase accessionMIMAT0001518
Sequence
0- AUUGUACUUCAUCAGGUGCUCUGG -24
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Co-mature sequence

Aga-Mir-305_3p

mirBase accessionNone
Sequence
40- CGGCACAUGUUGGAGUACACUCU -63
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