| MirGeneDB ID | Tur-Mir-305 |
|---|
| Family name |
MIR-305 (all species) |
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| Seed |
UUGUACU |
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| Species |
Two-spotted spider mite (Tetranychus urticae) |
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| MiRBase ID |
tur-mir-305
|
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| Paralogues |
|
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| Orthologues |
Aae-Mir-305
Aga-Mir-305
Asu-Mir-305
Bge-Mir-305
Cbr-Mir-305-P1
Cbr-Mir-305-P2
Cbr-Mir-305-P3
Cel-Mir-305-P1
Cel-Mir-305-P2
Csc-Mir-305
Dan-Mir-305
Dlo-Mir-305
Dma-Mir-305
Dme-Mir-305
Dmo-Mir-305
Dpu-Mir-305
Dsi-Mir-305
Dya-Mir-305
Gpa-Mir-305
Hme-Mir-305
Isc-Mir-305
Lpo-Mir-305-P4
Lpo-Mir-305-P5
Lpo-Mir-305-P6
Lpo-Mir-305-P7
Lpo-Mir-305-P8
Tca-Mir-305
|
|---|
| Node of Origin (locus) |
Cryptovermes
|
|---|
| Node of Origin (family) |
Cryptovermes
|
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Genome context
(GCA_000239435.1_ASM23943v1_genomic_TUR_traces) |
HE587305.1: 3433624-3433695 [+]
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
UUUCUUUUGAAGACCAAUGGAAGCUUGUUAUUUGUACUUCAUCAGGUGCUCUGUGUUAUUUUUUAUGUUAUGAUGUUUCAGACAUCUGAAGAAGUACAUUUAUCAAGGCUUAACCGGAGUACAUCGACCAUA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
UUUCUUUUGAAGACCAAUGG- GU-| UU A C UGUUAUUUUUUA
AAGCUU UA UGUACUUC UCAGGUG UCUG \
UUCGGA AU ACAUGAAG AGUCUAC AGAC U
AUACCAGCUACAUGAGGCCAA ACU^ UU A - UUUGUAGUAUUG
130 120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
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| Motifs | UGUG in loop |
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Tissue expression
|
|
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| Mature sequence |
Tur-Mir-305_5p |
| mirBase accession | MIMAT0023114 |
|---|
| Sequence |
0- UUUGUACUUCAUCAGGUGCUCUG -23
Get sequence
|
|---|
| Star sequence |
Tur-Mir-305_3p* |
| mirBase accession | MIMAT0023115 |
|---|
| Sequence |
50- GACAUCUGAAGAAGUACAUUUA -72
Get sequence
|
|---|
