MirGeneDB 3.0
MirGeneDB ID

Isc-Mir-305

Family name MIR-305 (all species)
Seed UUGUACU
Species Deer tick (Ixodes scapularis)
MiRBase ID isc-mir-305
Paralogues
Orthologues Aae-Mir-305  Aga-Mir-305  Asu-Mir-305  Bge-Mir-305  Cbr-Mir-305-P1  Cbr-Mir-305-P2  Cbr-Mir-305-P3  Cel-Mir-305-P1  Cel-Mir-305-P2  Csc-Mir-305  Dan-Mir-305  Dlo-Mir-305  Dma-Mir-305  Dme-Mir-305  Dmo-Mir-305  Dpu-Mir-305  Dsi-Mir-305  Dya-Mir-305  Gpa-Mir-305  Hme-Mir-305  Lpo-Mir-305-P4  Lpo-Mir-305-P5  Lpo-Mir-305-P6  Lpo-Mir-305-P7  Lpo-Mir-305-P8  Tca-Mir-305  Tur-Mir-305 
Node of Origin (locus) Cryptovermes
Node of Origin (family) Cryptovermes
Genome context
(GCF_016920785.2_ASM1692078v2_ISC)		 NW_024609835.1: 9524414-9524478 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-305)		 Mir-305 NW_024609835.1: 9524414-9524478 [-] Ensembl
Mir-275 NW_024609835.1: 9540839-9540901 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
GUGGUUUUCGUGCGGCCCAGUCACUAGUUAAUUGUACUUCAUCAGGUGCUCUGGAGUUCGGUUCGCACAACCAGGCAUCUUUUGGAGUGCAAAUGAUAAGUGGCACGAAUACGUCCAGACCAUCG
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Structure
        10          20        30        40        50        60  
GUGGUUUUCGUGCGGCCCA--|     A    A          UC      U    AGUUCGG 
                     GUCACU GUUA UUGUACUUCA  AGGUGC CUGG       U
                     CGGUGA UAGU AACGUGAGGU  UCUACG GACC       U
GCUACCAGACCUGCAUAAGCA^     A    A          UU      -    AACACGC 
   120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Em Em Em Em Em Em Em Em Em Em Em Em Em Em Em Em Em Em Em Em Em Em Em Sa Sa To
Mature sequence

Isc-Mir-305_5p
mirBase accessionMIMAT0018920
Sequence 
0- AUUGUACUUCAUCAGGUGCUCUGG -24
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Star sequence

Isc-Mir-305_3p*
mirBase accessionNone
Sequence 
42- AGGCAUCUUUUGGAGUGCAAAUG -65
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