MirGeneDB 3.0
MirGeneDB ID

Tca-Mir-305

Family name MIR-305 (all species)
Seed UUGUACU
Species Red flour beetle (Tribolium castaneum)
MiRBase ID tca-mir-305
Paralogues
Orthologues Aae-Mir-305  Aga-Mir-305  Asu-Mir-305  Bge-Mir-305  Cbr-Mir-305-P1  Cbr-Mir-305-P2  Cbr-Mir-305-P3  Cel-Mir-305-P1  Cel-Mir-305-P2  Csc-Mir-305  Dan-Mir-305  Dlo-Mir-305  Dma-Mir-305  Dme-Mir-305  Dmo-Mir-305  Dpu-Mir-305  Dsi-Mir-305  Dya-Mir-305  Gpa-Mir-305  Hme-Mir-305  Isc-Mir-305  Lpo-Mir-305-P4  Lpo-Mir-305-P5  Lpo-Mir-305-P6  Lpo-Mir-305-P7  Lpo-Mir-305-P8  Tur-Mir-305 
Node of Origin (locus) Cryptovermes
Node of Origin (family) Cryptovermes
Genome context
(Tcas5.2)		 LG9: 11129702-11129760 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-305)		 Mir-305 LG9: 11129702-11129760 [-] Ensembl
Mir-275 LG9: 11129838-11129898 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
GCAUAUUUCAACGCCCUCUGUCACAUGUCUAUUGUACUUCAUCAGGUGCUCUGGUAUACUUUUUCCCGACACCUGUUGGAGUGCACUAAUUAUGUGGCUCGUUUCACCAAACUGAUUUU
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Structure
        10          20        30        40        50         
GCAUAUUUCAACGCCCUCU--|       UC  U         U      C  U  UAUA 
                     GUCACAUG  UA UGUACUUCA CAGGUG UC GG    C
                     CGGUGUAU  AU ACGUGAGGU GUCCAC AG CC    U
UUUUAGUCAAACCACUUUGCU^       UA  C         U      -  C  UUUU 
       110       100        90        80        70         60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ad Ea Em Em Em Em Em Fe Fe Fe Fe Oo
Mature sequence

Tca-Mir-305_5p
mirBase accessionMIMAT0008388
Sequence 
0- AUUGUACUUCAUCAGGUGCUCUGG -24
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Star sequence

Tca-Mir-305_3p*
mirBase accessionMIMAT0019128
Sequence 
36- CGACACCUGUUGGAGUGCACUAA -59
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