Mir-305

MirGeneDB ID

Asu-Mir-305

Family name

MIR-305 (all species)

Seed

UUGUACU

Species

Large roundworm (Ascaris suum)

MiRBase ID

asu-mir-239

Paralogues

Orthologues

Aae-Mir-305 Aga-Mir-305 Bge-Mir-305 Cbr-Mir-305-P1 Cbr-Mir-305-P2 Cbr-Mir-305-P3 Cel-Mir-305-P1 Cel-Mir-305-P2 Csc-Mir-305 Dan-Mir-305 Dlo-Mir-305 Dma-Mir-305 Dme-Mir-305 Dmo-Mir-305 Dpu-Mir-305 Dsi-Mir-305 Dya-Mir-305 Gpa-Mir-305 Hme-Mir-305 Isc-Mir-305 Lpo-Mir-305-P4 Lpo-Mir-305-P5 Lpo-Mir-305-P6 Lpo-Mir-305-P7 Lpo-Mir-305-P8 Tca-Mir-305 Tur-Mir-305

Node of Origin (locus)

Cryptovermes

Node of Origin (family)

Cryptovermes

Genome context
(ASU_PRJNA80881_plustraces)

Scaffold465: 140784-140842 [+]

Precursor
(pre-Mir +30nt flank)

UGGGUGUGGUUGAUUGCCAGCUUGUUGAACUUUGUACUUCGGCUAAGGUGCUGCUCUAUGGCGGCCAGUACCUUGGCUAGGUGCAACGCUGAAUAGUUGGCUUCGAUAGUGAUGCGGCG

Get precursor sequence

Structure

        10           20        30        40        50         
UGGGUGUGGUUGAUUGC---|    UGUUGAACU        C             CUCUA 
                    CAGCU         UUGUACUU GGCUAAGGUGCUG     U
                    GUUGA         AACGUGGA UCGGUUCCAUGAC     G
GCGGCGUAGUGAUAGCUUCG^    UAAGUCGC-        -             CGGCG 
       110       100        90         80         70        60