MirGeneDB 3.0
MirGeneDB ID

Cel-Mir-305-P2

Family name MIR-305 (all species)
Seed UUGUACU
Species Roundworm (Caenorhabditis elegans)
MiRBase ID cel-mir-239b
Paralogues Cel-Mir-305-P1 
Orthologues Aae-Mir-305  Aga-Mir-305  Asu-Mir-305  Bge-Mir-305  Cbr-Mir-305-P2  Csc-Mir-305  Dan-Mir-305  Dlo-Mir-305  Dma-Mir-305  Dme-Mir-305  Dmo-Mir-305  Dpu-Mir-305  Dsi-Mir-305  Dya-Mir-305  Gpa-Mir-305  Hme-Mir-305  Isc-Mir-305  Tca-Mir-305  Tur-Mir-305 
Node of Origin (locus) Caenorhabditis
Node of Origin (family) Cryptovermes
Genome context
(ce11)		 chrX: 11791321-11791384 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-305-P2)		 Mir-305-P2 chrX: 11791321-11791384 [-] UCSC Ensembl
Mir-305-P1 chrX: 11792460-11792524 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUCUGAAAAGUUACAGCGACAGAUGCAAUUUUUGUACUACACAAAAGUACUGGUCAUUUAAGUUGAGGCUCAGCACUUUUGUGGUGUGCAAAAAUGGCAAGUUGCUUUUAUCUCAAUGAGAACG
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Structure
        10            20        30        40        50        60 
UUCUGAAAAGUUACAGC----|  AGA   A          UA         A   GUCAUUUA 
                     GAC   UGC AUUUUUGUAC  CACAAAAGU CUG        A
                     UUG   ACG UAAAAACGUG  GUGUUUUCA GAC        G
GCAAGAGUAACUCUAUUUUCG^  A--   G          UG         C   UCGGAGUU 
  120       110       100          90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Da Ea Mi Wi Yo Yo
Mature sequence

Cel-Mir-305-P2_5p
mirBase accessionMIMAT0000295
Sequence 
0- UUUGUACUACACAAAAGUACUG -22
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Proposed targets microrna.org: MIMAT0000295
TargetScanWorm: cel-miR-239b
Star sequence

Cel-Mir-305-P2_3p*
mirBase accessionMIMAT0015115
Sequence 
42- GCACUUUUGUGGUGUGCAAAAA -64
Get sequence
Proposed targets microrna.org: MIMAT0015115