| MirGeneDB ID | Dma-Mir-305 |
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| Family name |
MIR-305 (all species) |
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| Seed |
UUGUACU |
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| Species |
Large common water flea (Daphnia magna) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Aae-Mir-305
Aga-Mir-305
Asu-Mir-305
Bge-Mir-305
Cbr-Mir-305-P1
Cbr-Mir-305-P2
Cbr-Mir-305-P3
Cel-Mir-305-P1
Cel-Mir-305-P2
Csc-Mir-305
Dan-Mir-305
Dlo-Mir-305
Dme-Mir-305
Dmo-Mir-305
Dpu-Mir-305
Dsi-Mir-305
Dya-Mir-305
Gpa-Mir-305
Hme-Mir-305
Isc-Mir-305
Lpo-Mir-305-P4
Lpo-Mir-305-P5
Lpo-Mir-305-P6
Lpo-Mir-305-P7
Lpo-Mir-305-P8
Tca-Mir-305
Tur-Mir-305
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| Node of Origin (locus) |
Cryptovermes
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| Node of Origin (family) |
Cryptovermes
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Genome context
(DMA_ASM399081) |
NC_046180.1: 7554472-7554559 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
ACGCCUCGAAGAUAGAAGCACCUGUUGUUCAUUGUACUUCAUCAGGUGCUCUGGUCAAUCGUACGUAAACGUUUCCUUUGUGGAAAUCAUAUUCCCGGCACCUGCUGGAGUGCAAUUGAUGCGAAAGUGCAUUUGACAUCCAUCGACU
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60 70
ACGCCUCGAAGAUAGAA- CUG - -| U CU UCAAUCGUACGUAAACGUU
GCAC UUGU UC AUUGUACUUCA CAGGUGCU GG \
CGUG AGCG AG UAACGUGAGGU GUCCACGG CC U
UCAGCUACCUACAGUUUA AA- U U^ C C- UUAUACUAAAGGUGUUUCC
140 130 120 110 100 90 80 |
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| Deep sequencing |
Go to detailed chart
|
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| Comment | There is a second Dicer cut -3 on both arms. |
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| 3' NTU |
No
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| Motifs | No |
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Tissue expression
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| Mature sequence |
Dma-Mir-305_5p |
| mirBase accession | None |
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| Sequence |
0- AUUGUACUUCAUCAGGUGCUCUGG -24
Get sequence
|
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| Star sequence |
Dma-Mir-305_3p* |
| mirBase accession | None |
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| Sequence |
65- CGGCACCUGCUGGAGUGCAAUUG -88
Get sequence
|
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