MirGeneDB 3.0
MirGeneDB ID

Cel-Mir-355

Family name MIR-355 (all species)
Seed UUGUUUU
Species Roundworm (Caenorhabditis elegans)
MiRBase ID cel-mir-355
Paralogues
Orthologues Cbr-Mir-355 
Node of Origin (locus) Caenorhabditis
Node of Origin (family) Caenorhabditis
Genome context
(ce11)		 chrII: 11833564-11833623 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-355)		 Mir-355 chrII: 11833564-11833623 [-] UCSC Ensembl
Mir-5594 chrII: 11865130-11865187 [-] UCSC Ensembl
Mir-279-P11 chrII: 11880959-11881025 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUGAGAUUAAUAAUGUCAAGAAUUGAAUGGUUUGUUUUAGCCUGAGCUAUGAGUCAUCGGAAUAUGCAUAGCUUCUUGCUAAAACAUGCCAAUCAAUCUUAAUUGACGAAGUUUUUGAAA
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Structure
        10           20        30        40         50         
UUGAGAUUAAUAAUGUC---|   A    A    U         CU-        AGUCAUC 
                    AAGA UUGA UGGU UGUUUUAGC   GAGCUAUG       \
                    UUCU AACU ACCG ACAAAAUCG   UUCGAUAC       G
AAAGUUUUUGAAGCAGUUAA^   -    A    U         UUC        GUAUAAG 
.       110       100         90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Da Ea Mi Wi Yo Yo
Mature sequence

Cel-Mir-355_5p
mirBase accessionMIMAT0000697
Sequence 
0- UUUGUUUUAGCCUGAGCUAUG -21
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Proposed targets microrna.org: MIMAT0000697
TargetScanWorm: cel-miR-355
Star sequence

Cel-Mir-355_3p*
mirBase accessionMIMAT0031895
Sequence 
38- UAGCUUCUUGCUAAAACAUGCC -60
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