MirGeneDB 3.0
MirGeneDB ID

Cbr-Mir-279-P13

Family name MIR-279 (all species)
Seed GAGUUCA
Species Roundworm (Caenorhabditis briggsae)
MiRBase ID cbr-mir-247
Paralogues Cbr-Mir-279-P10  Cbr-Mir-279-P11a  Cbr-Mir-279-P11b  Cbr-Mir-279-P12 
Orthologues Agr-Mir-279  Bpl-Mir-279  Cel-Mir-279-P13  Eba-Mir-279  Egr-Mir-279  Esc-Mir-279  Gsa-Mir-279  Gsp-Mir-279  Hru-Mir-279  Isc-Mir-279  Lgi-Mir-279  Lhy-Mir-279  Llo-Mir-279  Mgi-Mir-279  Mom-Mir-279  Npo-Mir-279  Obi-Mir-279  Ovu-Mir-279  Pau-Mir-279  Pcr-Mir-279  Pve-Mir-279  Rph-Mir-279  Sma-Mir-279  Sne-Mir-279 
Node of Origin (locus) Caenorhabditis
Node of Origin (family) Protostomia
Genome context
(CB4)		 X: 10093683-10093743 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
AUUCCUAUUCCGAACUUCCUCCCUCCGAGUAGAGUUCAGACCCUGGUGACCUACAGCAGUAGCAUGAGGUGACUAGAGUGCUGAGCUCUCCUUGGUUCAGAGGCAUCAUAUUCAUGCUAUA
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Structure
        10         20         30         40        50         
AUUCCUAUUCCGAACUU-    CCU-     U         -| C     G   UACAGCA 
                  CCUC    CCGAG AGAGUUCAG AC CUGGU ACC       G
                  GGAG    GGUUC UCUCGAGUC UG GAUCA UGG       U
AUAUCGUACUUAUACUAC    ACUU     C         G^ A     G   AGUACGA 
 .       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Ea Ma Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Yo Yo
Mature sequence

Cbr-Mir-279-P13_5p
mirBase accessionNone
Sequence 
0- AGAGUUCAGACCCUGGUGACC -21
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Co-mature sequence

Cbr-Mir-279-P13_3p
mirBase accessionMIMAT0029605
Sequence 
39- UGACUAGAGUGCUGAGCUCUCC -61
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