| MirGeneDB ID | Cbr-Mir-392 |
|---|
| Family name |
MIR-392 (all species) |
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| Seed |
UCAUCGA |
|---|
| Species |
Roundworm (Caenorhabditis briggsae) |
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| MiRBase ID |
cbr-mir-392
|
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| Paralogues |
|
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| Orthologues |
Cel-Mir-392-v1
Cel-Mir-392-v2
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| Node of Origin (locus) |
Caenorhabditis
|
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| Node of Origin (family) |
Caenorhabditis
|
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Genome context
(CB4) |
X: 19329050-19329110 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UUAUCUUUUUAAAAUCCUGCAUUUAUCUGACAUCUCACAUUAUUGAGGAUAUAAACUAAAUAAAGAAAUAUCAUCGAUCAUGUGAGCUGUUAGAUUAUCAGAUUUCUAUGGAUUCUUCAUA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UUAUCUUUUUAAAAUCCUGCAUUU--| U U G AAACUAA
AUCUGACA CUCACAU AUUGA GAUAU \
UAGAUUGU GAGUGUA UAGCU CUAUA A
AUACUUCUUAGGUAUCUUUAGACUAU^ C C A AAGAAAU
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
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Tissue expression
|
| Ea |
Ma |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Yo |
Yo |
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| Star sequence |
Cbr-Mir-392_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- CAUCUCACAUUAUUGAGGAUAU -22
Get sequence
|
|---|
| Mature sequence |
Cbr-Mir-392_3p |
| mirBase accession | MIMAT0004299 |
|---|
| Sequence |
39- AUCAUCGAUCAUGUGAGCUGUU -61
Get sequence
|
|---|
