MirGeneDB 3.0
MirGeneDB ID

Cel-Mir-392-v1

Family name MIR-392 (all species)
Seed UCAUCGA
Species Roundworm (Caenorhabditis elegans)
MiRBase ID cel-mir-392
Paralogues Cel-Mir-392-v2 
Orthologues Cbr-Mir-392 
Node of Origin (locus) Caenorhabditis
Node of Origin (family) Caenorhabditis
Genome context
(ce11)		 chrX: 13597261-13597319 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-392-v1)		 Mir-392-v1 chrX: 13597261-13597319 [+] UCSC Ensembl
Mir-392-v2 chrX: 13597261-13597319 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUUUUGAAAAUCUCGCAGACGUGUUCAGUCAGCAUUCGUGGUUGAGGAUAUCGAACACAAAAAAAGAUAUCAUCGAUCACGUGUGAUGACAGAUUUUCUGCGACUAACAGGUUUGCUUA
Get precursor sequence
Structure
        10        20          30        40        50         
UUUUUGAAAAUCUCGCAGACGUGUUCA--|   G   U         G     CGAACAC 
                             GUCA CAU CGUGGUUGA GAUAU       \
                             CAGU GUG GCACUAGCU CUAUA       A
AUUCGUUUGGACAAUCAGCGUCUUUUAGA^   A   U         A     GAAAAAA 
       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
-   +
Da Ea Mi Wi Yo Yo
Star sequence

Cel-Mir-392-v1_5p*
mirBase accessionMIMAT0020344
Sequence 
0- AGCAUUCGUGGUUGAGGAUAU -21
Get sequence
Mature sequence

Cel-Mir-392-v1_3p
mirBase accessionMIMAT0000768
Sequence 
38- AUCAUCGAUCACGUGUGAUGA -59
Get sequence
Proposed targets microrna.org: MIMAT0000768
TargetScanWorm: cel-miR-392