MirGeneDB 3.0
MirGeneDB ID

Cel-Mir-248-v1

Family name MIR-248 (all species)
Seed UACACGU
Species Roundworm (Caenorhabditis elegans)
MiRBase ID cel-mir-248
Paralogues Cel-Mir-248-v2 
Orthologues Cbr-Mir-248-v1 
Node of Origin (locus) Caenorhabditis
Node of Origin (family) Caenorhabditis
Genome context
(ce11)		 chrX: 2262388-2262448 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-248-v1)		 Mir-248-v1 chrX: 2262388-2262448 [-] UCSC Ensembl
Mir-248-v2 chrX: 2262388-2262448 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GUUACUACUUUCCCGGCUGCAACUACGGUAAGCGGUAUCCAGCCGAUGUUUUCAAUACUGCAUUUGAAUACACGUGCACGGAUAACGCUCAUUGUUUUUCGCAUGCCAAUUUCACAAAUGG
Get precursor sequence
Structure
        10         20         30        40          50         
GUUACUACUUUCCCGGC-   -  CU     A    G     A-  -| A   U   AAUAC 
                  UGC AA  ACGGU AGCG UAUCC  GC CG UGU UUC     U
                  ACG UU  UGUUA UCGC AUAGG  CG GC ACA AAG     G
GGUAAACACUUUAACCGU   C  UU     C    A     CA  U^ -   U   UUUAC 
 .       110       100        90        80         70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
-   +
Da Ea Mi Wi Yo Yo
Star sequence

Cel-Mir-248-v1_5p*
mirBase accessionNone
Sequence 
0- AGCGGUAUCCAGCCGAUGUUUUC -23
Get sequence
Mature sequence

Cel-Mir-248-v1_3p
mirBase accessionMIMAT0000304
Sequence 
37- AUACACGUGCACGGAUAACGCUCA -61
Get sequence
Proposed targets microrna.org: MIMAT0000304
TargetScanWorm: cel-miR-248