MirGeneDB 3.0
MirGeneDB ID

Cbr-Mir-788-v2

Family name MIR-788 (all species)
Seed AAAUGGG
Species Roundworm (Caenorhabditis briggsae)
MiRBase ID cbr-mir-788
Paralogues Cbr-Mir-788-v1 
Orthologues Cel-Mir-788-v2 
Node of Origin (locus) Caenorhabditis
Node of Origin (family) Caenorhabditis
Genome context
(CB4)		 X: 16382877-16382943 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-788-v2)		 Mir-788-v1 X: 16382877-16382943 [+] Ensembl
Mir-788-v2 X: 16382877-16382943 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UGAAUAUUCGAUUAGCCUGAAACUAACUUUUCCGCUUCUCAAUGCUCCAUUUGCAAAAUCAAAUUGAUUUUCUUGCAAAUGGGAUGAGAACCGGAAACGUUUGAUUGACGGAAACUUUGAAAAUGGU
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Structure
        10        20          30        40        50        60    
UGAAUAUUCGAUUAGCCUGAAACU--|  U      C      AUGC          AAAUCAAA 
                          AAC UUUCCG UUCUCA    UCCAUUUGCA        U
                          UUG AAAGGC AAGAGU    GGGUAAACGU        U
UGGUAAAAGUUUCAAAGGCAGUUAGU^  C      C      A---          UCUUUUAG 
     120       110       100        90           80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Ea Ma Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Yo Yo
Star sequence

Cbr-Mir-788-v2_5p*
mirBase accessionMIMAT0004289
Sequence 
0- UCCGCUUCUCAAUGCUCCAUUUGCA -25
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Mature sequence

Cbr-Mir-788-v2_3p
mirBase accessionNone
Sequence 
45- CAAAUGGGAUGAGAACCGGAAA -67
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