MirGeneDB ID | Cbr-Mir-784 |
Family name |
MIR-784 (all species) |
Seed |
GGCACAA |
Species |
Roundworm (Caenorhabditis briggsae) |
MiRBase ID |
cbr-mir-784
|
Paralogues |
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Orthologues |
Cel-Mir-784
|
Node of Origin (locus) |
Caenorhabditis
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Node of Origin (family) |
Caenorhabditis
|
Genome context (CB4) |
X: 13857300-13857362 [-]
Ensembl
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Precursor (pre-Mir +30nt flank) |
CGGAUCCAUUCCUCAAUUUGUACUACCAAGUGGCACAAUACCUGUAUGUAGAUAGUGAAGUAAUAUUGUUCUACAUACACCUAUUGAGCCACCUGGUGGAUUCGCAAAACUCUUUGAUGUCUA
Get precursor sequence
|
Structure | 10 20 30 40 50 60
CGGAUCCAUUCCUCAAUUUGUA--| A A CC UAGUGAAG
CUACCA GUGGC CAAUA UGUAUGUAGA \
GGUGGU CACCG GUUAU ACAUACAUCU U
AUCUGUAGUUUCUCAAAACGCUUA^ C A CC UGUUAUAA
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
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Ea |
Ma |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Wh |
Yo |
Yo |
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Mature sequence |
Cbr-Mir-784_5p |
mirBase accession | MIMAT0004285 |
Sequence |
0- UGGCACAAUACCUGUAUGUAGA -22
Get sequence
|
Star sequence |
Cbr-Mir-784_3p* |
mirBase accession | None |
Sequence |
41- UACAUACACCUAUUGAGCCACC -63
Get sequence
|