MirGeneDB 3.0

MirGeneDB ID

Cel-Mir-784

Family name MIR-784 (all species)
Seed GGCACAA
Species Roundworm (Caenorhabditis elegans)
MiRBase ID cel-mir-784
Paralogues
Orthologues Cbr-Mir-784 
Node of Origin (locus) Caenorhabditis
Node of Origin (family) Caenorhabditis
Genome context
(ce11)
chrX: 8074934-8074996 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AUUCGUAUUCUCAGUUUUUCGACGUCCACGUGGCACAAUCUGCGUACGUAGAAAGAUCAAAAAGUCACUUCUAUGUACAAAUGUUGCGCUGCCUGGCACAGUGAAUGAAUUUAUGGGUUAAAA
Get precursor sequence
Structure
        10         20         30        40        50        60 
AUUCGUAUUCUCAGUUU-    AC  -|  C UG  A    CUGC         AAGAUCAA 
                  UUCG  GU CCA G  GC CAAU    GUACGUAGA        \
                  AAGU  CA GGU C  CG GUUG    CAUGUAUCU        A
AAAAUUGGGUAUUUAAGU    GA  C^  C GU  C    UAAA         UCACUGAA 
 120       110       100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
 +
Da Ea Mi Wi Yo Yo
Mature sequence

Cel-Mir-784_5p

mirBase accessionMIMAT0004219
Sequence
0- UGGCACAAUCUGCGUACGUAGA -22
Get sequence
Proposed targets microrna.org: MIMAT0004219
TargetScanWorm: cel-miR-784
Star sequence

Cel-Mir-784_3p*

mirBase accessionMIMAT0020347
Sequence
41- UAUGUACAAAUGUUGCGCUGCC -63
Get sequence