Mir-10-P3n

MirGeneDB ID

Cbr-Mir-10-P3n

Family name

MIR-10 (all species)

Seed

CCCUGAG

Species

Roundworm (Caenorhabditis briggsae)

MiRBase ID

cbr-mir-237

Paralogues

Cbr-Mir-10-P1 Cbr-Mir-10-P2 Cbr-Mir-10-P3m

Orthologues

Aae-Mir-10-P3 Adi-Mir-10 Aga-Mir-10-P3 Agr-Mir-10-P3 Asp-Mir-10 Asu-Mir-10-P3 Bfl-Mir-10-P3 Bge-Mir-10-P3 Bko-Mir-10-P3 Bla-Mir-10-P3 Bpl-Mir-10-P3 Cel-Mir-10-P3n Cin-Mir-10-P3 Cte-Mir-10-P3 Dan-Mir-10-P3 Dlo-Mir-10-P3 Dma-Mir-10-P3 Dme-Mir-10-P3 Dmo-Mir-10-P3 Dpu-Mir-10-P3 Dsi-Mir-10-P3 Dya-Mir-10-P3 Eba-Mir-10-P3 Egr-Mir-10-P3 Esc-Mir-10-P3 Gpa-Mir-10-P3 Gsa-Mir-10-P3 Gsp-Mir-10-P3 Hru-Mir-10-P3 Isc-Mir-10-P3 Lan-Mir-10-P3 Lgi-Mir-10-P3 Lhy-Mir-10-P3 Llo-Mir-10-P3 Mgi-Mir-10-P3 Mom-Mir-10-P3 Nag-Mir-10-P3-v1 Nag-Mir-10-P3-v2 Nve-Mir-10 Obi-Mir-10-P3 Ofu-Mir-10-P3 Ovu-Mir-10-P3 Pau-Mir-10-P3 Pca-Mir-10-P3 Pcr-Mir-10-P3 Pdu-Mir-10-P3 Ple-Mir-10-P3 Pmi-Mir-10-P3 Pve-Mir-10-P3 Rph-Mir-10-P3 Sko-Mir-10-P3 Snu-Mir-10-P3 Spu-Mir-10-P3 Tca-Mir-10-P3 War-Mir-10-P3 Xbo-Mir-10-P3

Node of Origin (locus)

Caenorhabditis

Node of Origin (family)

Eumetazoa

Genome context
(CB4)

X: 16760725-16760783 [-] Ensembl

Precursor
(pre-Mir +30nt flank)

UUCUUUAGUCUUGAAAACCAUGUUUGGUGGUCCCUGAGAAUGCUCCGACAUCUUCGAAGUAGCGUAGCUGUCGAGCACCAUUGGGGACCAGCGGAUUUUUGGUUAUAAUUUUUUUCAAG

Get precursor sequence

Structure

        10        20          30        40        50         
UUCUUUAGUCUUGAAAACCAU--|    G       UG GAA     C    U  UCGAA 
                       GUUUG UGGUCCC  A   UGCUC GACA CU     G
                       UAGGC ACCAGGG  U   ACGAG CUGU GA     U
GAACUUUUUUUAAUAUUGGUUUU^    G       GU ACC     -    C  UGCGA 
       110       100        90        80         70        60