MirGeneDB 3.0
MirGeneDB ID

Cbr-Mir-281-P3

Family name MIR-281 (all species)
Seed GUCAUGG
Species Roundworm (Caenorhabditis briggsae)
MiRBase ID cbr-mir-46
Paralogues Cbr-Mir-281-P4 
Orthologues Aae-Mir-281  Aga-Mir-281  Agr-Mir-281  Asu-Mir-281  Bfl-Mir-281  Bge-Mir-281  Bko-Mir-281  Bla-Mir-281  Bpl-Mir-281  Cel-Mir-281-P3  Cin-Mir-281  Csc-Mir-281  Cte-Mir-281  Dgr-Mir-281  Dlo-Mir-281  Dma-Mir-281  Dpu-Mir-281  Eba-Mir-281  Ebu-Mir-281  Egr-Mir-281  Esc-Mir-281  Gsa-Mir-281  Hme-Mir-281  Hru-Mir-281  Isc-Mir-281  Lhy-Mir-281  Llo-Mir-281  Mgi-Mir-281  Mom-Mir-281  Npo-Mir-281  Obi-Mir-281  Ofu-Mir-281  Ovu-Mir-281  Pca-Mir-281  Pcr-Mir-281  Pdu-Mir-281  Pfl-Mir-281  Rph-Mir-281  Sko-Mir-281  Sma-Mir-281  Sme-Mir-281  Snu-Mir-281  Sto-Mir-281  Tca-Mir-281  Tur-Mir-281  War-Mir-281 
Node of Origin (locus) Caenorhabditis
Node of Origin (family) Nephrozoa
Genome context
(CB4)		 III: 5569432-5569492 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UGGUAAGUUGAAGAGAUACAAGUGAAGCUGAAGAGAGCCGUCUAUUGACAGUUCGCUUGUUUCAUGUGCUGUCAUGGAGUCGCUCUCUUCAGAUGAUCUGAAUCUAAAUGUUAUAUUUUCC
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Structure
        10        20          30        40         50          
UGGUAAGUUGAAGAGAUACA--  UGAAG           CG-|    U      UCGCUUG 
                      AG     CUGAAGAGAGC   UCUAU GACAGU       \
                      UC     GACUUCUCUCG   AGGUA CUGUCG       U
CCUUUUAUAUUGUAAAUCUAAG  UAGUA           CUG^    -      UGUACUU 
 .       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Ea Ma Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Wh Yo Yo
Star sequence

Cbr-Mir-281-P3_5p*
mirBase accessionNone
Sequence 
0- AAGAGAGCCGUCUAUUGACAGU -22
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Mature sequence

Cbr-Mir-281-P3_3p
mirBase accessionMIMAT0000471
Sequence 
39- UGUCAUGGAGUCGCUCUCUUCA -61
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