MirGeneDB 3.0
MirGeneDB ID

Dpu-Mir-87-o5b

Family name MIR-87 (all species)
Seed UGAGCAA
Species Common water flea (Daphnia pulex)
MiRBase ID
Paralogues Dpu-Mir-87-o5a 
Orthologues Dma-Mir-87-o5b  Gsp-Mir-87  Sne-Mir-87 
Node of Origin (locus) Daphnia
Node of Origin (family) Protostomia
Genome context
(Daphnia_pulex.V1.0)		 DAPPUscaffold_1: 2191079-2191142 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UCCAUCUAGAUUUGGUGUAUUUACGCUCUCAGCCUGAUCCUUGCUCGACCUAAGCCUUUGACAAUGAGCGAGGUGAGCAAAGUUUCAGGUGCGUGAGCGGCACCUCCAGUCGUCCUAUCCGAUC
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Structure
        10        20          30         40         50        60 
UCCAUCUAGAUUUGGUGUAUUUA--     UCA-      UC -|     G    AAGCCUUUG 
                         CGCUC    GCCUGA  C UUGCUC ACCU         \
                         GCGAG    UGGACU  G AACGAG UGGA         A
CUAGCCUAUCCUGCUGACCUCCACG     UGCG      UU A^     -    GCGAGUAAC 
  120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Dpu-Mir-87-o5b_5p*
mirBase accessionNone
Sequence 
0- AGCCUGAUCCUUGCUCGACCU -21
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Mature sequence

Dpu-Mir-87-o5b_3p
mirBase accessionNone
Sequence 
42- GUGAGCAAAGUUUCAGGUGCGU -64
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