MirGeneDB 3.0
MirGeneDB ID

Efe-Mir-87-o12

Family name MIR-87 (all species)
Seed UGAGCAA
Species Common brandling worm (Eisenia fetida)
MiRBase ID
Paralogues Efe-Mir-87-o13  Efe-Mir-87-o14  Efe-Mir-87-o15  Efe-Mir-87-o16  Efe-Mir-87-o17  Efe-Mir-87-o18 
Orthologues Gsp-Mir-87  Sne-Mir-87 
Node of Origin (locus) E. fetida
Node of Origin (family) Protostomia
Genome context
(Efe_combined)		 Efet.01.236014: 861-925 [+]
Precursor
(pre-Mir +30nt flank)
AAAAGAGAGUCAGUGGCAGUCGAUACAGGUAUGCCUGAAAUCUUGACUCAGUCCACUUGCCAAUGCUGAGCUGGUGAGCAAAGUUUCAGGUAUAUCGGCAAGGUACUGCAAUCUCAUCUGGACAU
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Structure
        10                20        30        40        50        60   
AAAAGAGAGUCAGUGGCA--------|      CAGGUA         UC   A    GU  ACUUGCCA 
                          GUCGAUA      UGCCUGAAA  UUG CUCA  CC        A
                          CGGCUAU      AUGGACUUU  AAC GAGU  GG        U
UACAGGUCUACUCUAACGUCAUGGAA^      ------         GA   -    --  UCGAGUCG 
   120       110       100              90        80           70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
To
Star sequence

Efe-Mir-87-o12_5p*
mirBase accessionNone
Sequence 
0- AUGCCUGAAAUCUUGACUCAGUCC -24
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Mature sequence

Efe-Mir-87-o12_3p
mirBase accessionNone
Sequence 
43- GUGAGCAAAGUUUCAGGUAUAU -65
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