MirGeneDB 3.0
MirGeneDB ID

Efe-Mir-87-o13

Family name MIR-87 (all species)
Seed UGAGCAA
Species Common brandling worm (Eisenia fetida)
MiRBase ID
Paralogues Efe-Mir-87-o12  Efe-Mir-87-o14  Efe-Mir-87-o15  Efe-Mir-87-o16  Efe-Mir-87-o17  Efe-Mir-87-o18 
Orthologues Gsp-Mir-87  Sne-Mir-87 
Node of Origin (locus) E. fetida
Node of Origin (family) Protostomia
Genome context
(Efe_combined)		 scaffold4028-size35901: 11038-11096 [-]
Precursor
(pre-Mir +30nt flank)
GUCUCCGCACCUCAGUUUCUUUUAUCCGUUCGACCUGAAAUGUUGUCUCAGACCUCGAAUGGCAAAGGUGAGCAAGGUUUCAGGUUGUCCGAAACGAAACCAACCGUUUCCGAAUCGAU
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Structure
        10        20          30        40        50        60
GUCUCCGCACCUCAGUUUCUUUUAUC--| UU           G   U   AG    CGAA 
                            CG  CGACCUGAAAU UUG CUC  ACCU    U
                            GC  GUUGGACUUUG AAC GAG  UGGA    G
UAGCUAAGCCUUUGCCAACCAAAGCAAA^ CU           G   -   --    AACG 
       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
To
Star sequence

Efe-Mir-87-o13_5p*
mirBase accessionNone
Sequence 
0- CGACCUGAAAUGUUGUCUCAGACCU -25
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Mature sequence

Efe-Mir-87-o13_3p
mirBase accessionNone
Sequence 
37- GUGAGCAAGGUUUCAGGUUGUC -59
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