MirGeneDB 3.0

MirGeneDB ID

War-Mir-87-o29

Family name MIR-87 (all species)
Seed UGAGCAA
Species Wirenia (Solenogaster) (Wirenia argentea)
MiRBase ID
Paralogues
Orthologues Agr-Mir-87-o29  Eba-Mir-87-o29  Gsp-Mir-87  Mom-Mir-87-o29  Sne-Mir-87 
Node of Origin (locus) Aculifera
Node of Origin (family) Protostomia
Genome context
(GCA_025802215.1_ASM2580221v1_Wirenia)
WNLI01038430.1: 816-873 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
GAAAUGUCACAGAAAUAUCCGUGUCACAUGUGCCUGAAAUUUUGUCUCAAGCCUGUGAUUAAUUAAGGUGAGCAAAGUUUCAGGUGUGUGGGAUGCGGUAUCGAUCAUCACACUUGGU
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Structure
        10          20        30        40        50          
GAAAUGUCACAGAAAUAU--|      A    UG            U   AA    GUGAU 
                    CCGUGUC CAUG  CCUGAAAUUUUG CUC  GCCU     \
                    GGCGUAG GUGU  GGACUUUGAAAC GAG  UGGA     U
UGGUUCACACUACUAGCUAU^      G    GU            -   --    AUUAA 
      110       100        90        80         70
Deep sequencing
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CommentIt is unclear if this is Mir-87-P1 or P2 given that one of the paralogues was lost in this group and there are no sequence signatures to recognize one paralogue from the other.
3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
 +
To
Star sequence

War-Mir-87-o29_5p* (predicted)

mirBase accessionNone
Sequence
0- UGCCUGAAAUUUUGUCUCAAGCCU -24
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Mature sequence

War-Mir-87-o29_3p

mirBase accessionNone
Sequence
37- GUGAGCAAAGUUUCAGGUGUG -58
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