| MirGeneDB ID | Pcr-Mir-87-o37 |
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| Family name |
MIR-87 (all species) |
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| Seed |
UGAGCAA |
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| Species |
Tiger flatworm (Prostheceraeus crozieri ) |
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| MiRBase ID |
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| Paralogues |
Pcr-Mir-87-o36
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| Orthologues |
Gsp-Mir-87
Sne-Mir-87
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| Node of Origin (locus) |
P. crozeri
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| Node of Origin (family) |
Protostomia
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Genome context
(GCA_907163375.1_PROCRO_GENOME_genomic) |
CAJQUW010012358.1: 219856-219918 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GGGCGAGGUACAGAAUGACCGUAGAUGGACAGGCCUGACUCUUUGGCUCAAGCCAACAUCGUGAAUCGAUGGUGAGCAAAGUUUCAGGCUCGUCGGUUACGGAAUGAUCUUCAAUUUGGUGUU
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
GGGCGAGGUACAGAAUGA---| A G AG CU G AA ACAUCG
CCGU GAU GAC GCCUGA CUUUG CUC GCCA U
GGCA UUG CUG CGGACU GAAAC GAG UGGU G
UUGUGGUUUAACUUCUAGUAA^ - G CU UU - -- AGCUAA
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
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| Star sequence |
Pcr-Mir-87-o37_5p* |
| mirBase accession | None |
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| Sequence |
0- AGGCCUGACUCUUUGGCUCAAGCCA -25
Get sequence
|
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| Mature sequence |
Pcr-Mir-87-o37_3p |
| mirBase accession | None |
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| Sequence |
41- GUGAGCAAAGUUUCAGGCUCGU -63
Get sequence
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