| MirGeneDB ID | Esc-Mir-87-o6 |
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| Family name |
MIR-87 (all species) |
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| Seed |
UGAGCAA |
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| Species |
Hawaiian bobtail squid (Euprymna scolopes) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
Gsp-Mir-87
Obi-Mir-87-o6
Ovu-Mir-87-o6
Sne-Mir-87
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| Node of Origin (locus) |
Coleoidea
|
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| Node of Origin (family) |
Protostomia
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Genome context
(GCA_004765925.1_miRNA_LOCI) |
Esc-Mir-87-P2_pre_SRIE01017693.1:1126159-1126299: 41-101 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AAAUUUAUUUCUAAUUUUGACUGGUCAGCCCGGCCUGAAAUUUUGUCUCGAACCUCUCCAGUCCAGAAGGUGAGCAAAGUUUCAGGUGUAGCUGACCAGACAAUUUUCAGCUGAUGUUUCA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
AAAUUUAUUUCUAAUUU--| A CCG U GA CUCCA
UG CUGGUCAGC GCCUGAAAUUUUG CUC ACCU G
AC GACCAGUCG UGGACUUUGAAAC GAG UGGA U
ACUUUGUAGUCGACUUUUA^ A AUG - -- AGACC
. 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| Comment | It is not clear whether this is a descendant of the original Mir-87-P1 or -P2 gene. |
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Star sequence |
Esc-Mir-87-o6_5p* |
| mirBase accession | None |
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| Sequence |
0- CGGCCUGAAAUUUUGUCUCGAACCU -25
Get sequence
|
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| Mature sequence |
Esc-Mir-87-o6_3p |
| mirBase accession | None |
|---|
| Sequence |
39- GUGAGCAAAGUUUCAGGUGUAG -61
Get sequence
|
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