| MirGeneDB ID | Cte-Mir-2687 |
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| Family name |
MIR-2687 (all species) |
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| Seed |
AGGUAGU |
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| Species |
Polychaete worm (Capitella teleta) |
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| MiRBase ID |
cte-mir-2687
|
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| Paralogues |
|
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| Orthologues |
Efe-Mir-2687
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| Node of Origin (locus) |
Sedentaria
|
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| Node of Origin (family) |
Sedentaria
|
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Genome context
(Capitella_teleta_v1.0) |
CAPTEscaffold_610: 82412-82480 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
CGGAUGUUGUUGUUGCGCGGGACCCUUCGAUAGGUAGUCGCUCUGGGUUACUGUCGGGUCGUUAUACCCUUUGCAAGUGGCUCAGGGGGACCCCCUAUCCAAGGGCUGCUUGAUCGCUACGUGUGUGGA
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
CGGAUGUUGUUGUUGCGCG---| A C UA G GUCGGGUCGUU
GG CCCUU GAUAGG GUC CUCUGGGUUACU \
UC GGGAA CUAUCC CAG GGGACUCGGUGA A
AGGUGUGUGCAUCGCUAGUUCG^ - C CC G ACGUUUCCCAU
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Mature sequence |
Cte-Mir-2687_5p |
| mirBase accession | MIMAT0013539 |
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| Sequence |
0- UAGGUAGUCGCUCUGGGUUACU -22
Get sequence
|
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| Star sequence |
Cte-Mir-2687_3p* |
| mirBase accession | None |
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| Sequence |
47- UGGCUCAGGGGGACCCCCUAUC -69
Get sequence
|
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