MirGeneDB 2.1

MirGeneDB ID

Cte-Mir-2705

Family name MIR-2705 (all species)
Seed CUGCAAG
Species Polychaete worm (Capitella teleta)
MiRBase ID cte-mir-2705
Paralogues
Orthologues Efe-Mir-2705 
Node of Origin (locus) Annelida
Node of Origin (family) Annelida
Genome context
(Capitella_teleta_v1.0)
CAPTEscaffold_122: 377049-377108 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-2705)
Mir-2705 CAPTEscaffold_122: 377049-377108 [+] Ensembl
Mir-1987 CAPTEscaffold_122: 378005-378063 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UAAUUGCAAAUAACAUGCGCUUUGAGGUUGGGAGCACUUGCCGUUUGCAAAUGUUGCCUUCAUUUCAUCUGCAAGGUAAAGUGCUGUCCAACUUGAUAGUGCGAACCCUCCGAGAGUAUU
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Structure
        10          20        30          40        50         
UAAUUGCAAAUAACAUG--    UUG        -     -|    GU     A   UUGCC 
                   CGCU   AGGUUGGG AGCAC UUGCC  UUGCA AUG     U
                   GUGA   UUCAACCU UCGUG AAUGG  AACGU UAC     U
UUAUGAGAGCCUCCCAAGC    UAG        G     A^    --     C   UUUAC 
.       110       100        90        80          70        60
Deep sequencing
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CommentA star has not yet been recorded from this miRNA but it is deeply conserved across annelids.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
To
Star sequence

Cte-Mir-2705_5p* (predicted)

mirBase accessionNone
Sequence
0- GGAGCACUUGCCGUUUGCAAAUG -23
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Mature sequence

Cte-Mir-2705_3p

mirBase accessionMIMAT0013571
Sequence
37- UCUGCAAGGUAAAGUGCUGUCCA -60
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