| MirGeneDB ID | Cte-Novel-1 |
|---|---|
| Family name | CTE-NOVEL-1 (all species) |
| Seed | UUCAGAA |
| Species | Polychaete worm (Capitella teleta) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | |
| Node of Origin (locus) | C. teleta |
| Node of Origin (family) | C. teleta |
| Genome context (Capitella_teleta_v1.0) |
CAPTEscaffold_149: 353474-353536 [-] Ensembl |
| Precursor (pre-Mir +30nt flank) | CCAUCCAUCUGCGACUGUUCUGUGUGGAUUAUUCAGAAUUCAUGUGCGCGGUUCUGUUCCUAUUUAUUCUGAAUCCGUCUAGGAUUCUGGAGCUCCAUACUUGAUACCCCACGAGGCUCCAGAGet precursor sequence |
| Structure | 10 20 30 40 50 60 CCAUCCAUCUGCGACUGU- U-| UUA A U C UGUUCCU UC GUGUGGA UUCAGAAUUC UG GCG GGUUC A AG CAUACCU AGGUCUUAGG AU UGC CUAAG U AGACCUCGGAGCACCCCAU UU^ CG- - C - UCUUAUU 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | CNNC at 3p(+17), UGUG in loop |
| Mature sequence | Cte-Novel-1_5p |
| mirBase accession | None |
| Sequence |
0- AUUCAGAAUUCAUGUGCGCGGUUC -24
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|
| Co-mature sequence | Cte-Novel-1_3p |
| mirBase accession | None |
| Sequence |
42- AUCCGUCUAGGAUUCUGGAGC -63
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|
