| MirGeneDB ID | Efe-Mir-1994 |
|---|---|
| Family name | MIR-1994 (all species) |
| Seed | GAGACAG |
| Species | Common brandling worm (Eisenia fetida) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Agr-Mir-1994-P1 Agr-Mir-1994-P2 Cte-Mir-1994 Dgr-Mir-1994 Eba-Mir-1994-P1 Eba-Mir-1994-P2 Esc-Mir-1994-P1 Esc-Mir-1994-P2 Hru-Mir-1994-P1 Hru-Mir-1994-P2 Lan-Mir-1994-o1a Lan-Mir-1994-o1b Lan-Mir-1994-o2a Lan-Mir-1994-o2b Lgi-Mir-1994-P1 Lgi-Mir-1994-P2 Lhy-Mir-1994-P1 Llo-Mir-1994 Mgi-Mir-1994-P1 Mgi-Mir-1994-P2 Mom-Mir-1994-P1 Mom-Mir-1994-P2 Npo-Mir-1994-P1 Npo-Mir-1994-P2 Obi-Mir-1994-P1 Obi-Mir-1994-P2 Ofu-Mir-1994-P9 Ofu-Mir-1994-P10 Ovu-Mir-1994-P1 Ovu-Mir-1994-P2 Pau-Mir-1994-o3 Pau-Mir-1994-o4 Pve-Mir-1994-P1 Pve-Mir-1994-P2a Pve-Mir-1994-P2b Rph-Mir-1994-P1 Rph-Mir-1994-P2 Snu-Mir-1994-P5 Snu-Mir-1994-P6 Snu-Mir-1994-P7 Snu-Mir-1994-P8 War-Mir-1994-P1 War-Mir-1994-P2 |
| Node of Origin (locus) | Lophotrochozoa |
| Node of Origin (family) | Lophotrochozoa |
| Genome context (Efe_combined) |
Efet.01.1510066: 31-166 [-] |
| Precursor (pre-Mir +30nt flank) | AAGGAGGACCCACUUGCUUCGCCCGUGUGCGUGCAUGCUCAACAGGCGUCUACCUAGUGUCCUACGCUAGGUAUGCGACUGAUUGAUGCAUGACAUGCACCAAUGCAUCACCGGUGAGACAGUGCGUCCUCCCUCGGet precursor sequence |
| Structure | 10 20 30 40 50 60 AA-- C U CU C --------- - - -| G C UC GGAGGAC CAC UG UCGCC GU GUGCGUG CAUGC UCAA CAG CGU UACCUAGUG \ CCUCCUG GUG AC AGUGG CA CACGUAC GUACG AGUU GUC GCG AUGGAUCGC C GCUC C - AG C CUACGUAAC A U A^ A U AU 130 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | No |
| Star sequence | Efe-Mir-1994_5p* |
| mirBase accession | None |
| Sequence |
0- AAGGAGGACCCACUUGCUUCGCC -23
Get sequence
|
| Mature sequence | Efe-Mir-1994_3p |
| mirBase accession | None |
| Sequence |
114- UGAGACAGUGCGUCCUCCCUCG -136
Get sequence
|
