MirGeneDB 3.0

MirGeneDB ID

Lhy-Mir-1994-P1

Family name MIR-1994 (all species)
Seed GAGACAG
Species Laevipilina (Monoplacophora) (Laevipilina hyalina)
MiRBase ID
Paralogues
Orthologues Agr-Mir-1994-P1  Cte-Mir-1994  Dgr-Mir-1994  Eba-Mir-1994-P1  Efe-Mir-1994  Esc-Mir-1994-P1  Hru-Mir-1994-P1  Lan-Mir-1994-o1a  Lan-Mir-1994-o1b  Lgi-Mir-1994-P1  Llo-Mir-1994  Mgi-Mir-1994-P1  Mom-Mir-1994-P1  Npo-Mir-1994-P1  Obi-Mir-1994-P1  Ovu-Mir-1994-P1  Pve-Mir-1994-P1  Rph-Mir-1994-P1  War-Mir-1994-P1 
Node of Origin (locus) Mollusca
Node of Origin (family) Lophotrochozoa
Genome context
(Mono_atcgn_nospaces)
scaffold469496_30.9: 555-613 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UGAACUAAAAUACUACACGCAACUGGUCUCAGGGGGUGCACUCUGUUAUCGUGUUGGGGUGACGUCAUGAGACAGUGUGUCCUCCCUCAGAAGCAGGACAAUGCGUAAUCCGCAACACA
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Structure
        10        20          30        40        50         
UGAACUAAAAUACUACACGCAA-   G-|  C      UG   U     A     UUGGG 
                       CUG  UCU AGGGGG  CAC CUGUU UCGUG     G
                       GAC  AGA UCCCUC  GUG GACAG AGUAC     U
ACACAACGCCUAAUGCGUAACAG   GA^  C      CU   U     -     UGCAG 
       110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
To
Star sequence

Lhy-Mir-1994-P1_5p* (predicted)

mirBase accessionNone
Sequence
0- AGGGGGUGCACUCUGUUAUCGUG -23
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Mature sequence

Lhy-Mir-1994-P1_3p

mirBase accessionNone
Sequence
37- UGAGACAGUGUGUCCUCCCUCA -59
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