MirGeneDB 3.0

MirGeneDB ID

Dgr-Mir-1994

Family name MIR-1994 (all species)
Seed GAGACAG
Species Dimorphilus gyrociliatus (Dimorphilus gyrociliatus)
MiRBase ID
Paralogues
Orthologues Agr-Mir-1994-P1  Agr-Mir-1994-P2  Cte-Mir-1994  Eba-Mir-1994-P1  Eba-Mir-1994-P2  Efe-Mir-1994  Esc-Mir-1994-P1  Esc-Mir-1994-P2  Hru-Mir-1994-P1  Hru-Mir-1994-P2  Lan-Mir-1994-o1a  Lan-Mir-1994-o1b  Lan-Mir-1994-o2a  Lan-Mir-1994-o2b  Lgi-Mir-1994-P1  Lgi-Mir-1994-P2  Lhy-Mir-1994-P1  Llo-Mir-1994  Mgi-Mir-1994-P1  Mgi-Mir-1994-P2  Mom-Mir-1994-P1  Mom-Mir-1994-P2  Npo-Mir-1994-P1  Npo-Mir-1994-P2  Obi-Mir-1994-P1  Obi-Mir-1994-P2  Ofu-Mir-1994-P9  Ofu-Mir-1994-P10  Ovu-Mir-1994-P1  Ovu-Mir-1994-P2  Pau-Mir-1994-o3  Pau-Mir-1994-o4  Pve-Mir-1994-P1  Pve-Mir-1994-P2a  Pve-Mir-1994-P2b  Rph-Mir-1994-P1  Rph-Mir-1994-P2  Snu-Mir-1994-P5  Snu-Mir-1994-P6  Snu-Mir-1994-P7  Snu-Mir-1994-P8  War-Mir-1994-P1  War-Mir-1994-P2 
Node of Origin (locus) Lophotrochozoa
Node of Origin (family) Lophotrochozoa
Genome context
(GCA_904063045.1_Dgyrociliatus)
CAJFCJ010000006.1: 263956-264014 [+]
Precursor
(pre-Mir +30nt flank)
GAUGAUAAUGGACAGAUGGCGCUGUAGUAUAGGGACGGUGGCGGUGUCUUGUGCUAUAGGCAGUUCACGAGACAGUGCGUCCUCCCUCUACUUCAGUUUGCCUAAUUCAACCCUAAAUC
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Structure
        10        20          30        40        50         
GAUGAUAAUGGACAGAUG  --|   U    U     C  UG   G         CUAUA 
                  GC  GCUG AGUA AGGGA GG  GCG UGUCUUGUG     G
                  CG  UGAC UCAU UCCCU CC  CGU ACAGAGCAC     G
CUAAAUCCCAACUUAAUC  UU^   U    C     -  UG   G         UUGAC 
       110       100        90         80        70        60
Deep sequencing
3' NTU Unknown
MotifsUG at 5p(-14)
Star sequence

Dgr-Mir-1994_5p* (predicted)

mirBase accessionNone
Sequence
0- AGGGACGGUGGCGGUGUCUUGUG -23
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Mature sequence

Dgr-Mir-1994_3p (predicted)

mirBase accessionNone
Sequence
37- CGAGACAGUGCGUCCUCCCUCU -59
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