MirGeneDB 3.0
MirGeneDB ID

Llo-Mir-1994

Family name MIR-1994 (all species)
Seed GAGACAG
Species Bootlace worm (Lineus longissimus)
MiRBase ID
Paralogues
Orthologues Agr-Mir-1994-P1  Agr-Mir-1994-P2  Cte-Mir-1994  Dgr-Mir-1994  Eba-Mir-1994-P1  Eba-Mir-1994-P2  Efe-Mir-1994  Esc-Mir-1994-P1  Esc-Mir-1994-P2  Hru-Mir-1994-P1  Hru-Mir-1994-P2  Lan-Mir-1994-o1a  Lan-Mir-1994-o1b  Lan-Mir-1994-o2a  Lan-Mir-1994-o2b  Lgi-Mir-1994-P1  Lgi-Mir-1994-P2  Lhy-Mir-1994-P1  Mgi-Mir-1994-P1  Mgi-Mir-1994-P2  Mom-Mir-1994-P1  Mom-Mir-1994-P2  Npo-Mir-1994-P1  Npo-Mir-1994-P2  Obi-Mir-1994-P1  Obi-Mir-1994-P2  Ofu-Mir-1994-P9  Ofu-Mir-1994-P10  Ovu-Mir-1994-P1  Ovu-Mir-1994-P2  Pau-Mir-1994-o3  Pau-Mir-1994-o4  Pve-Mir-1994-P1  Pve-Mir-1994-P2a  Pve-Mir-1994-P2b  Rph-Mir-1994-P1  Rph-Mir-1994-P2  Snu-Mir-1994-P5  Snu-Mir-1994-P6  Snu-Mir-1994-P7  Snu-Mir-1994-P8  War-Mir-1994-P1  War-Mir-1994-P2 
Node of Origin (locus) Lophotrochozoa
Node of Origin (family) Lophotrochozoa
Genome context
(GCA_910592395.2_tnLinLong1)		 OU343003.1: 14179230-14179287 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UUGGAUACUGCAGAAUCAAAAUUUCUUCCACGGUUGGACAUGCUUGUCUGCAUGGCAUCAUAAUCAUGAGACAGUGUGUCCUCCCUCGGAAUGAAAGCUCUAACAUCGAAUGUCACCA
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Structure
        10        20          30        40        50         
UUGGAUACUGCAGAAUCAAAA-    -|   AC  UU         U    G    GCAU 
                      UUUC UUCC  GG  GGACAUGCU GUCU CAUG    C
                      AAAG AAGG  CC  CCUGUGUGA CAGA GUAC    A
ACCACUGUAAGCUACAAUCUCG    U^   CU  CU         -    -    UAAU 
      110       100        90        80         70         60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Sr Sr Sr Sr Sr Sr
Star sequence

Llo-Mir-1994_5p*
mirBase accessionNone
Sequence 
0- CGGUUGGACAUGCUUGUCUGCAUG -24
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Mature sequence

Llo-Mir-1994_3p
mirBase accessionNone
Sequence 
36- UGAGACAGUGUGUCCUCCCUCG -58
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