MirGeneDB 3.0
MirGeneDB ID

Snu-Mir-1994-P6

Family name MIR-1994 (all species)
Seed GAGACAG
Species Peanut worm (Sipunculus nudus)
MiRBase ID
Paralogues Snu-Mir-1994-P5  Snu-Mir-1994-P7  Snu-Mir-1994-P8 
Orthologues Cte-Mir-1994  Dgr-Mir-1994  Efe-Mir-1994  Llo-Mir-1994 
Node of Origin (locus) S. nudus
Node of Origin (family) Lophotrochozoa
Genome context
(GCA_026874595.1_ASM2687459v1_Sipunculus_nudus)		 CM049320.1: 15731518-15731575 [-]
Precursor
(pre-Mir +30nt flank)
AUAUACCUUUAAAGAUAUUGUUCUGUUUUCCGGGGAACAAGCUUGCCUCGUUUUCGAUGUUUUAAUGAGACAGCGUGUCCUCCCGUGAAGCGGAACUUGAAUUAUCACCCGCCAUGUC
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Structure
        10           20        30         40        50        
AUAUACCUUUAAAGAUAUU---         UC    -|A   A   U C      UUCGA 
                      GUUCUGUUU  CGGG G ACA GCU G CUCGUU     \
                      CAAGGCGAA  GCCC C UGU CGA C GAGUAA     U
CUGUACCGCCCACUAUUAAGUU         GU    U^C   G   - A      UUUUG 
      110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Snu-Mir-1994-P6_5p* (predicted)
mirBase accessionNone
Sequence 
0- CGGGGAACAAGCUUGCCUCGUU -22
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Mature sequence

Snu-Mir-1994-P6_3p
mirBase accessionNone
Sequence 
35- UGAGACAGCGUGUCCUCCCGUGA -58
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