MirGeneDB 3.0

MirGeneDB ID

Ofu-Mir-1994-P9

Family name MIR-1994 (all species)
Seed GAGACAG
Species Tubeworm (Owenia fusiformis)
MiRBase ID
Paralogues Ofu-Mir-1994-P10 
Orthologues Cte-Mir-1994  Dgr-Mir-1994  Efe-Mir-1994  Llo-Mir-1994 
Node of Origin (locus) O. fusiformis
Node of Origin (family) Lophotrochozoa
Genome context
(GCA_903813345.2_Owenia)
CAIIXF020000001.1: 56576378-56576438 [+]
Precursor
(pre-Mir +30nt flank)
CCAAGGAUUAAGAGCAUAAUCUUCACUCGUAGGGGGCUCACAUUGAUGUCAUAAUAUAUCAUUAACUUAUGAGACAGUGUGUCCUCCCUGUGGAUGAAGGUUCGAGCAUCAAAUACCUUAG
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Structure
        10          20        30        40        50        60
CCAAGGAUUAAGAGCAU--|       CU         CU       AUG     AUAUAU 
                   AAUCUUCA  CGUAGGGGG  CACAUUG   UCAUA      C
                   UUGGAAGU  GUGUCCCUC  GUGUGAC   AGUAU      A
GAUUCCAUAAACUACGAGC^       AG         CU       AG-     UCAAUU 
 .       110       100        90        80         70
Deep sequencing
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Ow Ow
Star sequence

Ofu-Mir-1994-P9_5p* (predicted)

mirBase accessionNone
Sequence
0- AGGGGGCUCACAUUGAUGUCAUA -23
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Mature sequence

Ofu-Mir-1994-P9_3p

mirBase accessionNone
Sequence
39- UGAGACAGUGUGUCCUCCCUGU -61
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