MirGeneDB 3.0

MirGeneDB ID

Ofu-Mir-1994-P10

Family name MIR-1994 (all species)
Seed GAGACAG
Species Tubeworm (Owenia fusiformis)
MiRBase ID
Paralogues Ofu-Mir-1994-P9 
Orthologues Cte-Mir-1994  Dgr-Mir-1994  Efe-Mir-1994  Llo-Mir-1994 
Node of Origin (locus) O. fusiformis
Node of Origin (family) Lophotrochozoa
Genome context
(GCA_903813345.2_Owenia)
CAIIXF020000001.1: 56578318-56578375 [+]
Precursor
(pre-Mir +30nt flank)
CCGGAGGAUUUCAAACUGCGUCAUGUUGUUCGGGACGACACUCUAUCUCGUUUUGUAUUAAAGCAAUGAGACAGUGUGUCCUCCCUCGUGGCGACGCUAAACUCAACCCGGGACACAG
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Structure
        10            20        30        40        50        
CCGGAGGAUUUCAAACU----|    AU  UG UC    C     U  A       UUGUA 
                     GCGUC  GU  U  GGGA GACAC CU UCUCGUU     U
                     CGCAG  CG  G  CCCU CUGUG GA AGAGUAA     U
GACACAGGGCCCAACUCAAAU^    --  GU CU    C     U  C       CGAAA 
      110       100          90        80        70        60
Deep sequencing
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
Ow Ow
Star sequence

Ofu-Mir-1994-P10_5p* (predicted)

mirBase accessionNone
Sequence
0- CGGGACGACACUCUAUCUCGUU -22
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Mature sequence

Ofu-Mir-1994-P10_3p

mirBase accessionNone
Sequence
36- UGAGACAGUGUGUCCUCCCUCG -58
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