MirGeneDB 3.0

MirGeneDB ID

Npo-Mir-216-P2d

Family name MIR-216 (all species)
Seed AAUCUCA
Species Chambered Nautilus (Nautilus pompilius)
MiRBase ID
Paralogues Npo-Mir-216-P2c 
Orthologues Aae-Mir-216-P2  Aga-Mir-216-P2  Agr-Mir-216-P2d  Asu-Mir-216-P2  Ava-Mir-216-P2  Bfl-Mir-216-P2  Bge-Mir-216-P2  Bko-Mir-216-P2  Bla-Mir-216-P2  Bpl-Mir-216-P2  Cbr-Mir-216-P2  Cel-Mir-216-P2  Csc-Mir-216-P2  Cte-Mir-216-P2d  Dan-Mir-216-P2  Dlo-Mir-216-P2  Dma-Mir-216-P2  Dme-Mir-216-P2  Dmo-Mir-216-P2  Dpu-Mir-216-P2  Dsi-Mir-216-P2  Dya-Mir-216-P2  Esc-Mir-216-P2d  Hme-Mir-216-P2  Hru-Mir-216-P2d  Isc-Mir-216-P2  Lan-Mir-216-P2d1  Lan-Mir-216-P2d2  Lgi-Mir-216-P2d  Lhy-Mir-216-P2d  Llo-Mir-216-P2d  Mgi-Mir-216-P2d  Mom-Mir-216-P2d  Obi-Mir-216-P2d  Ofu-Mir-216-P2d  Ovu-Mir-216-P2d  Pau-Mir-216-P2d  Pca-Mir-216-P2  Pdu-Mir-216-P2d  Pve-Mir-216-P2d  Rph-Mir-216-P2d  Snu-Mir-216-P2d  Tca-Mir-216-P2  Tur-Mir-216-P2 
Node of Origin (locus) Lophotrochozoa
Node of Origin (family) Nephrozoa
Genome context
(GCA_018389105_NPO)
JACATO010001670.1: 35814-35871 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
GCAUAUGUACUAUAUAUGUAGGCAUUUGUUUAAUCUCAGCUGGUAAUUAUGAGUUGGGUUGUAUAUCAAGUUACUAGCCGAGAUUAUAUGACUGUCGUACUAACCAGCACGAGGCCCU
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Structure
        10         20         30        40        50         
GCAUAUGUACUAUAUAU-   -|   U UG U       A          A   GUUGGG 
                  GUA GGCA U  U UAAUCUC GCUGGUAAUU UGA      \
                  CAU CUGU A  A AUUAGAG CGAUCAUUGA ACU      U
UCCCGGAGCACGACCAAU   G^   C GU U       C          -   AUAUGU 
      110       100        90        80        70         60
Deep sequencing
3' NTU Unknown
MotifsUG at 5p(-14), CNNC at 3p(+17)
Mature sequence

Npo-Mir-216-P2d_5p (predicted)

mirBase accessionNone
Sequence
0- UAAUCUCAGCUGGUAAUUAUGA -22
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Star sequence

Npo-Mir-216-P2d_3p* (predicted)

mirBase accessionNone
Sequence
37- AAGUUACUAGCCGAGAUUAUA -58
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