MirGeneDB 3.0
MirGeneDB ID

Llo-Mir-216-P2d

Family name MIR-216 (all species)
Seed AAUCUCA
Species Bootlace worm (Lineus longissimus)
MiRBase ID
Paralogues Llo-Mir-216-P2c 
Orthologues Aae-Mir-216-P2  Aga-Mir-216-P2  Agr-Mir-216-P2d  Asu-Mir-216-P2  Ava-Mir-216-P2  Bfl-Mir-216-P2  Bge-Mir-216-P2  Bko-Mir-216-P2  Bla-Mir-216-P2  Bpl-Mir-216-P2  Cbr-Mir-216-P2  Cel-Mir-216-P2  Csc-Mir-216-P2  Cte-Mir-216-P2d  Dan-Mir-216-P2  Dlo-Mir-216-P2  Dma-Mir-216-P2  Dme-Mir-216-P2  Dmo-Mir-216-P2  Dpu-Mir-216-P2  Dsi-Mir-216-P2  Dya-Mir-216-P2  Esc-Mir-216-P2d  Hme-Mir-216-P2  Hru-Mir-216-P2d  Isc-Mir-216-P2  Lan-Mir-216-P2d1  Lan-Mir-216-P2d2  Lgi-Mir-216-P2d  Lhy-Mir-216-P2d  Mgi-Mir-216-P2d  Mom-Mir-216-P2d  Npo-Mir-216-P2d  Obi-Mir-216-P2d  Ofu-Mir-216-P2d  Ovu-Mir-216-P2d  Pau-Mir-216-P2d  Pca-Mir-216-P2  Pdu-Mir-216-P2d  Pve-Mir-216-P2d  Rph-Mir-216-P2d  Snu-Mir-216-P2d  Tca-Mir-216-P2  Tur-Mir-216-P2 
Node of Origin (locus) Lophotrochozoa
Node of Origin (family) Nephrozoa
Genome context
(GCA_910592395.2_tnLinLong1)		 OU342994.1: 2298218-2298276 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UCGUGCAUAGCUGACUGUUGGAUGUUUAUCUAAUCUCAGCUGGUAAUUUUGAGUUGUGUUGAUCACUCAGAAUUCUGGUUGGGAUUUCAUGAAUGUCUAUAUUAACCCUUAAGCAUGCU
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Structure
        10          20        30        40        50         
UCGUGCAUAGCUGACUGU--|          CU         UG U         UUGUG 
                    UGGAUGUUUAU  AAUCUCAGC  G AAUUUUGAG     U
                    AUCUGUAAGUA  UUAGGGUUG  C UUAAGACUC     U
UCGUACGAAUUCCCAAUUAU^          CU         GU -         ACUAG 
       110       100        90        80         70        60
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
-   +
No No No No No No
Mature sequence

Llo-Mir-216-P2d_5p
mirBase accessionNone
Sequence 
0- UAAUCUCAGCUGGUAAUUUUGAG -23
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Star sequence

Llo-Mir-216-P2d_3p* (predicted)
mirBase accessionNone
Sequence 
37- CAGAAUUCUGGUUGGGAUUUCA -59
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