MirGeneDB 3.0
MirGeneDB ID

Esc-Mir-216-P2d

Family name MIR-216 (all species)
Seed AAUCUCA
Species Hawaiian bobtail squid (Euprymna scolopes)
MiRBase ID
Paralogues Esc-Mir-216-P1 
Orthologues Aae-Mir-216-P2  Aga-Mir-216-P2  Agr-Mir-216-P2d  Asu-Mir-216-P2  Ava-Mir-216-P2  Bfl-Mir-216-P2  Bge-Mir-216-P2  Bko-Mir-216-P2  Bla-Mir-216-P2  Bpl-Mir-216-P2  Cbr-Mir-216-P2  Cel-Mir-216-P2  Csc-Mir-216-P2  Cte-Mir-216-P2d  Dan-Mir-216-P2  Dlo-Mir-216-P2  Dma-Mir-216-P2  Dme-Mir-216-P2  Dmo-Mir-216-P2  Dpu-Mir-216-P2  Dsi-Mir-216-P2  Dya-Mir-216-P2  Hme-Mir-216-P2  Hru-Mir-216-P2d  Isc-Mir-216-P2  Lan-Mir-216-P2d1  Lan-Mir-216-P2d2  Lgi-Mir-216-P2d  Lhy-Mir-216-P2d  Llo-Mir-216-P2d  Mgi-Mir-216-P2d  Mom-Mir-216-P2d  Npo-Mir-216-P2d  Obi-Mir-216-P2d  Ofu-Mir-216-P2d  Ovu-Mir-216-P2d  Pau-Mir-216-P2d  Pca-Mir-216-P2  Pdu-Mir-216-P2d  Pve-Mir-216-P2d  Rph-Mir-216-P2d  Snu-Mir-216-P2d  Tca-Mir-216-P2  Tur-Mir-216-P2 
Node of Origin (locus) Lophotrochozoa
Node of Origin (family) Nephrozoa
Genome context
(GCA_004765925.1_miRNA_LOCI)		 Esc-Mir-216-P2_pre_SRIE01006986.1:177112-177371: 101-160 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
AUUUUGCAUGUUUUCUCCGUGAUCUUUGUAUAAUCUCAGCUAGUAAUUAUGAGUAGUUUCGAUAGUCUCAAGUUACUAGCCAAGAUUAUACAAAUGUCUGACUAAACAGCAUCGAAUCGA
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Structure
        10        20          30        40        50          
AUUUUGCAUGUUUUCUCCGU--|  C            CA          A   GUAGUUU 
                      GAU UUUGUAUAAUCU  GCUAGUAAUU UGA       \
                      CUG AAACAUAUUAGA  CGAUCAUUGA ACU       C
AGCUAAGCUACGACAAAUCAGU^  U            AC          -   CUGAUAG 
.       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Li
Mature sequence

Esc-Mir-216-P2d_5p
mirBase accessionNone
Sequence 
0- UAAUCUCAGCUAGUAAUUAUGA -22
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Star sequence

Esc-Mir-216-P2d_3p*
mirBase accessionNone
Sequence 
39- AAGUUACUAGCCAAGAUUAUA -60
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