MirGeneDB 3.0
MirGeneDB ID

Lhy-Mir-216-P2d

Family name MIR-216 (all species)
Seed AAUCUCA
Species Laevipilina (Monoplacophora) (Laevipilina hyalina)
MiRBase ID
Paralogues Lhy-Mir-216-P1  Lhy-Mir-216-P2c 
Orthologues Aae-Mir-216-P2  Aga-Mir-216-P2  Agr-Mir-216-P2d  Asu-Mir-216-P2  Ava-Mir-216-P2  Bfl-Mir-216-P2  Bge-Mir-216-P2  Bko-Mir-216-P2  Bla-Mir-216-P2  Bpl-Mir-216-P2  Cbr-Mir-216-P2  Cel-Mir-216-P2  Csc-Mir-216-P2  Cte-Mir-216-P2d  Dan-Mir-216-P2  Dlo-Mir-216-P2  Dma-Mir-216-P2  Dme-Mir-216-P2  Dmo-Mir-216-P2  Dpu-Mir-216-P2  Dsi-Mir-216-P2  Dya-Mir-216-P2  Esc-Mir-216-P2d  Hme-Mir-216-P2  Hru-Mir-216-P2d  Isc-Mir-216-P2  Lan-Mir-216-P2d1  Lan-Mir-216-P2d2  Lgi-Mir-216-P2d  Llo-Mir-216-P2d  Mgi-Mir-216-P2d  Mom-Mir-216-P2d  Npo-Mir-216-P2d  Obi-Mir-216-P2d  Ofu-Mir-216-P2d  Ovu-Mir-216-P2d  Pau-Mir-216-P2d  Pca-Mir-216-P2  Pdu-Mir-216-P2d  Pve-Mir-216-P2d  Rph-Mir-216-P2d  Snu-Mir-216-P2d  Tca-Mir-216-P2  Tur-Mir-216-P2 
Node of Origin (locus) Lophotrochozoa
Node of Origin (family) Nephrozoa
Genome context
(Mono_atcgn_nospaces)		 scaffold389854_29.2: 3428-3487 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
CCUUACACCUUCGGUUUGUGGAUGUUUGUAUAAUCUCAGCUGGUAAUUAUUGAGUGUUGUCGAAGUCUCAAGUUACUAGCCGAGAUUACACUAAUGCCAUACUAACCAGCAUGAAUAACA
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Structure
        10           20        30        40        50        60
CCUUACACCUUCGGUUU---|   A    U  A       A         UA     UGUUG 
                    GUGG UGUU GU UAAUCUC GCUGGUAAU  UUGAG     U
                    UACC GUAA CA AUUAGAG CGAUCAUUG  AACUC     C
ACAAUAAGUACGACCAAUCA^   -    U  C       C         --     UGAAG 
.       110       100         90        80          70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
To
Mature sequence

Lhy-Mir-216-P2d_5p
mirBase accessionNone
Sequence 
0- UAAUCUCAGCUGGUAAUUAUUGAG -24
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Co-mature sequence

Lhy-Mir-216-P2d_3p
mirBase accessionNone
Sequence 
38- CAAGUUACUAGCCGAGAUUACA -60
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