MirGeneDB 3.0
MirGeneDB ID

Pau-Mir-2-P12

Family name MIR-2 (all species)
Seed AUCACAG
Species Horseshoe worm (Phoronis australis)
MiRBase ID
Paralogues Pau-Mir-2-o109  Pau-Mir-2-o110  Pau-Mir-2-o111  Pau-Mir-2-o112  Pau-Mir-2-o113 
Orthologues Agr-Mir-2-P12a  Agr-Mir-2-P12b  Agr-Mir-2-P12c  Agr-Mir-2-P12d  Agr-Mir-2-P12e  Agr-Mir-2-P12f1  Agr-Mir-2-P12f2  Cte-Mir-2-P12  Dgr-Mir-2-P12  Efe-Mir-2-P12f  Efe-Mir-2-P12g  Esc-Mir-2-P12  Gsp-Mir-2  Hru-Mir-2-P12  Lgi-Mir-2-P12a  Lgi-Mir-2-P12b  Lgi-Mir-2-P12c  Lgi-Mir-2-P12d  Lgi-Mir-2-P12e  Lhy-Mir-2-P12  Llo-Mir-2-P12  Mgi-Mir-2-P12  Mom-Mir-2-P12f  Mom-Mir-2-P12g  Mom-Mir-2-P12h  Mom-Mir-2-P12i  Mom-Mir-2-P12j  Mom-Mir-2-P12k  Npo-Mir-2-P12  Obi-Mir-2-P12  Ofu-Mir-2-P12  Ovu-Mir-2-P12  Pdu-Mir-2-P12  Ple-Mir-2  Pve-Mir-2-P12  Rph-Mir-2-P12  War-Mir-2-P12 
Node of Origin (locus) Lophotrochozoa
Node of Origin (family) Protostomia
Genome context
(Phoronis_australis_GCA_002633005)		 NMRA01000510.1: 286403-286457 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UAUGUCCCUGGACAUGAUAGCUUGUUGUAGGUGUCCACCAGGGAGUGAUGUGUUGCUGGUCAUAUCACAGCCUGCUUGGAUAACCUGUAGCCAGUCAUUUUCUGCAGUCUCUCCU
Get precursor sequence
Structure
        10         20        30          40        50      
UAUGUCCCUGGACAUGAUA-   U        -      C-|   GA        UUG 
                    GCU GUUGUAGG UGUCCA  CAGG  GUGAUGUG   C
                    UGA CGAUGUCC AUAGGU  GUCC  CACUAUAC   U
UCCUCUCUGACGUCUUUUAC   C        A      UC^   GA        UGG 
   110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Pau-Mir-2-P12_5p* (predicted)
mirBase accessionNone
Sequence 
0- GUGUCCACCAGGGAGUGAUGUG -22
Get sequence
Mature sequence

Pau-Mir-2-P12_3p
mirBase accessionNone
Sequence 
32- UAUCACAGCCUGCUUGGAUAACC -55
Get sequence